Homer de novo Motif Results (hs_cholangiocarcinoma_HuCCT1_cancer_CDK9_SRX1013341_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 656
Total background sequences = 48604
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A T G C G T C A A C T G A T C G C T A G C T A G A C G T A G T C A T G C G T A C A T G C A C T G A C T G A C G T A C T G T A C G 1e-12-2.911e+011.07%0.01%14.5bp (23.0bp)PLAG1/MA0163.1/Jaspar(0.619)
More Information | Similar Motifs Found		motif file (matrix)
2 A C T G A G T C G T A C A G T C A G C T A C T G A G T C A G T C G T A C A T C G A G T C A G T C A C T G G T C A A C T G A C T G 1e-12-2.836e+010.92%0.01%21.9bp (6.0bp)Sp1(Zf)/Promoter/Homer(0.698)
More Information | Similar Motifs Found		motif file (matrix)
3 * A G C T A C T G A T G C G A T C A G C T G A C T A C T G A C T G T A G C G A C T A T G C A G T C C G A T C T A G A C T G A C T G 1e-11-2.679e+012.60%0.25%24.2bp (23.7bp)ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer(0.669)
More Information | Similar Motifs Found		motif file (matrix)
4 * A C T G A C T G A G C T A T G C A G T C A C T G A C G T A C T G C T A G A C T G C G T A A C T G A C G T 1e-11-2.640e+010.76%0.00%12.1bp (0.0bp)EGR2/MA0472.2/Jaspar(0.677)
More Information | Similar Motifs Found		motif file (matrix)
5 * A G T C A G T C C G A T A G T C A G T C A C G T A G T C A G C T A C T G C G A T A G T C C G T A A C T G A G T C A G T C C G T A 1e-11-2.640e+010.76%0.00%20.0bp (15.0bp)ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer(0.630)
More Information | Similar Motifs Found		motif file (matrix)
6 * C T G A A C T G C T A G A C T G C G T A A T G C C A G T A C G T A T C G C G T A C T A G C G A T A C T G C G T A A T C G A C T G 1e-10-2.423e+011.98%0.15%22.5bp (28.0bp)Nkx2-5(var.2)/MA0503.1/Jaspar(0.545)
More Information | Similar Motifs Found		motif file (matrix)
7 * C G T A G C A T T C G A T A C G C T A G A G T C C G T A T G C A T G C A C T G A A C T G A G T C C G T A A C T G A G T C G T C A 1e-10-2.369e+011.22%0.03%24.4bp (27.7bp)PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer(0.591)
More Information | Similar Motifs Found		motif file (matrix)
8 * A C G T A C T G A C T G C A T G C G T A C T G A C G T A C T A G A C T G A G T C A C G T A C T G A C T G 1e-9-2.290e+010.92%0.01%17.7bp (18.7bp)Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.662)
More Information | Similar Motifs Found		motif file (matrix)
9 * C G T A T A G C C T G A T C G A C G T A T A G C T A C G T A G C G T A C C T G A 1e-9-2.280e+013.05%0.48%24.8bp (28.6bp)Sox3/MA0514.1/Jaspar(0.671)
More Information | Similar Motifs Found		motif file (matrix)
10 * C G T A A C T G A G T C T C G A A T C G C G T A A C T G A C T G A C T G C T A G C G T A A C T G A T C G 1e-9-2.152e+011.07%0.03%26.0bp (23.4bp)PB0128.1_Gcm1_2/Jaspar(0.626)
More Information | Similar Motifs Found		motif file (matrix)
11 * A G T C A G T C A G T C A C T G G T A C T A C G C T G A C G T A A C T G A C G T A C T G C G T A A C T G 1e-9-2.092e+010.76%0.01%19.9bp (8.6bp)E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer(0.586)
More Information | Similar Motifs Found		motif file (matrix)
12 * C A T G A C T G G A T C A C T G G T A C A T G C G T A C A C T G C T G A A C T G 1e-9-2.077e+014.27%1.05%25.6bp (27.8bp)ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.716)
More Information | Similar Motifs Found		motif file (matrix)
13 * C G T A A C T G A C T G A G T C A G T C A C G T A C T G C T A G C G T A C G T A A C G T A C T G A C T G 1e-8-2.046e+010.61%0.00%20.1bp (0.0bp)TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer(0.724)
More Information | Similar Motifs Found		motif file (matrix)
14 * C G T A A T G C C G T A A C T G A T G C A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C T G 1e-8-2.046e+010.61%0.00%28.0bp (0.0bp)MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer(0.638)
More Information | Similar Motifs Found		motif file (matrix)
15 * A G T C T A G C A G T C T A C G A G T C A T C G A G T C C G T A A G T C A C T G A G T C A T G C A G T C C G T A A G T C A T G C 1e-8-2.046e+010.61%0.00%18.4bp (2.6bp)SP3/MA0746.1/Jaspar(0.691)
More Information | Similar Motifs Found		motif file (matrix)
16 * G T A C C T G A A T G C A C G T G T C A A G C T A C G T C G T A A G T C A G T C C G T A A G T C A C G T 1e-8-2.011e+010.92%0.02%15.5bp (29.0bp)COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer(0.615)
More Information | Similar Motifs Found		motif file (matrix)
17 * A G T C A G T C A C T G C G T A A C T G G T C A A C T G A G T C A T C G A G T C A C G T A C G T A C T G 1e-8-1.950e+010.76%0.01%27.6bp (10.2bp)PB0140.1_Irf6_2/Jaspar(0.647)
More Information | Similar Motifs Found		motif file (matrix)
18 * A C T G A T G C A G T C G C A T A G T C C A G T A G T C G C T A A T C G T C G A 1e-8-1.870e+012.60%0.43%26.6bp (27.7bp)Nkx2-5(var.2)/MA0503.1/Jaspar(0.688)
More Information | Similar Motifs Found		motif file (matrix)
19 * A C G T A C T G A C G T A C T G A C G T C T G A A C G T A C T G A G T C G A T C A C G T A C T G A C T G 1e-7-1.838e+011.07%0.04%19.8bp (30.4bp)FOXF2/MA0030.1/Jaspar(0.589)
More Information | Similar Motifs Found		motif file (matrix)
20 * T C G A G T A C A G T C A T G C T C A G A T C G C T G A A T G C A G T C A C T G 1e-7-1.814e+0111.15%5.50%26.3bp (27.9bp)PB0153.1_Nr2f2_2/Jaspar(0.608)
More Information | Similar Motifs Found		motif file (matrix)
21 * A T G C G T A C A G T C C G A T G C T A C A T G A C T G C T A G G T C A C T G A C T A G G A T C C T G A A C T G A G C T C T A G 1e-7-1.726e+011.37%0.10%26.9bp (24.6bp)PB0086.1_Tcfap2b_1/Jaspar(0.620)
More Information | Similar Motifs Found		motif file (matrix)
22 * A C G T A C T G C T A G A G T C A C T G C G T A A G T C A C T G C T A G C G T A 1e-7-1.680e+011.07%0.05%18.0bp (27.4bp)PB0112.1_E2F2_2/Jaspar(0.668)
More Information | Similar Motifs Found		motif file (matrix)
23 * A C G T A G T C C T A G C A T G G T A C A C G T A G T C A C G T C T G A A C G T T C G A G T C A C T G A 1e-6-1.601e+011.68%0.20%24.5bp (29.4bp)ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer(0.569)
More Information | Similar Motifs Found		motif file (matrix)
24 * A G T C C G T A A C G T C G T A A T C G C G T A A T C G A C G T C G T A A C G T A C T G A T G C C T G A 1e-6-1.476e+010.46%0.00%23.2bp (0.0bp)POU4F1/MA0790.1/Jaspar(0.667)
More Information | Similar Motifs Found		motif file (matrix)
25 * A C G T A T C G A C G T A G T C G C T A A T C G A G T C A C G T A C G T G T C A G C T A C A T G A G T C 1e-6-1.476e+010.46%0.00%10.1bp (15.9bp)Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer(0.648)
More Information | Similar Motifs Found		motif file (matrix)
26 * C G A T C G A T C G A T C G A T G C A T G A C T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T 1e-2-4.629e+000.31%0.02%9.7bp (20.8bp)PB0182.1_Srf_2/Jaspar(0.802)
More Information | Similar Motifs Found		motif file (matrix)