Information for 9-CCGAGMGCSCTKK (Motif 17)

A G T C A G T C A C T G C G T A A C T G G T C A A C T G A G T C A T C G A G T C A C G T A C G T A C T G
Reverse Opposite:
G T A C G T C A C G T A A C T G A T G C A C T G A G T C A C G T A G T C A C G T A G T C A C T G A C T G
p-value:1e-8
log p-value:-1.950e+01
Information Content per bp:1.883
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.2 +/- 27.6bp
Average Position of motif in Background47.6 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGMGCSCTKK
NNNACCGAGAGTNNN--
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A C T G G T C A A C T G A G T C A T C G A G T C A C G T A C G T A C T G
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGMGCSCTKK
GNNACCGAGAATNNN--
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A C T G G T C A A C T G A G T C A T C G A G T C A C G T A C G T A C T G
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCGAGMGCSCTKK-
ANCGCGCGCCCTTNN
 A C G T A G T C A G T C A C T G C G T A A C T G G T C A A C T G A G T C A T C G A G T C A C G T A C G T A C T G A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCGAGMGCSCTKK-
NTCGCGCGCCTTNNN
 A C G T A G T C A G T C A C T G C G T A A C T G G T C A A C T G A G T C A T C G A G T C A C G T A C G T A C T G A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCGAGMGCSCTKK
TTGACCGAGAATTCC--
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A C T G G T C A A C T G A G T C A T C G A G T C A C G T A C G T A C T G
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCGAGMGCSCTKK---
NNNNTGAGCACTGTNNG
 A C G T A G T C A G T C A C T G C G T A A C T G G T C A A C T G A G T C A T C G A G T C A C G T A C G T A C T G A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCGAGMGCSCTKK
GAGSCCGAGC-------
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A C T G G T C A A C T G A G T C A T C G A G T C A C G T A C G T A C T G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCGAGMGCSCTKK-
TGGCGCGCGCGCCTGA
 A C G T A C G T A G T C A G T C A C T G C G T A A C T G G T C A A C T G A G T C A T C G A G T C A C G T A C G T A C T G A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CCGAGMGCSCTKK
TTGAGTGSTT---
 A G T C A G T C A C T G C G T A A C T G G T C A A C T G A G T C A T C G A G T C A C G T A C G T A C T G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CCGAGMGCSCTKK
BTBRAGTGSN----
 A C G T A G T C A G T C A C T G C G T A A C T G G T C A A C T G A G T C A T C G A G T C A C G T A C G T A C T G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T