Information for 2-GKTSCKTGRGAGT (Motif 4)

A C T G A C T G A G C T A T G C A G T C A C T G A C G T A C T G C T A G A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A G T C A G T C A G T C C G T A G T A C A C T G A T C G C T G A G T A C G T A C
p-value:1e-11
log p-value:-2.640e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.4 +/- 12.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR2/MA0472.2/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GKTSCKTGRGAGT
--TGCGTGGGCGT
 A C T G A C T G A G C T A T G C A G T C A C T G A C G T A C T G C T A G A C T G C G T A A C T G A C G T
A C G T A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

EGR3/MA0732.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GKTSCKTGRGAGT--
ANTGCGTGGGCGTNN
 A C T G A C T G A G C T A T G C A G T C A C T G A C G T A C T G C T A G A C T G C G T A A C T G A C G T A C G T A C G T
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G

EGR4/MA0733.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GKTSCKTGRGAGT--
AANTGCGTGGGCGTNN
 A C G T A C T G A C T G A G C T A T G C A G T C A C T G A C G T A C T G C T A G A C T G C G T A A C T G A C G T A C G T A C G T
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GKTSCKTGRGAGT
--TGCGTGGGYG-
 A C T G A C T G A G C T A T G C A G T C A C T G A C G T A C T G C T A G A C T G C G T A A C T G A C G T
A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GKTSCKTGRGAGT-
--NGCGTGGGCGGR
 A C T G A C T G A G C T A T G C A G T C A C T G A C G T A C T G C T A G A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GKTSCKTGRGAGT
-TTGCGTGCVA--
 A C T G A C T G A G C T A T G C A G T C A C T G A C G T A C T G C T A G A C T G C G T A A C T G A C G T
A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GKTSCKTGRGAGT
ANTCCCTNGGGAAT
 A C G T A C T G A C T G A G C T A T G C A G T C A C T G A C G T A C T G C T A G A C T G C G T A A C T G A C G T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GKTSCKTGRGAGT-
----CSTGGGAAAD
 A C T G A C T G A G C T A T G C A G T C A C T G A C G T A C T G C T A G A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GKTSCKTGRGAGT---
-NNNACCGAGAGTNNN
 A C T G A C T G A G C T A T G C A G T C A C T G A C G T A C T G C T A G A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GKTSCKTGRGAGT
--TGCGTG-----
 A C T G A C T G A G C T A T G C A G T C A C T G A C G T A C T G C T A G A C T G C G T A A C T G A C G T
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T