Information for 6-ATAGGCAAAAGCAGCA (Motif 7)

C G T A G C A T T C G A T A C G C T A G A G T C C G T A T G C A T G C A C T G A A C T G A G T C C G T A A C T G A G T C G T C A
Reverse Opposite:
A C G T C T A G G T A C A C G T A C T G A G T C A G C T A C G T A C G T A C G T A C T G A G T C A G T C A G C T C G T A G C A T
p-value:1e-10
log p-value:-2.369e+01
Information Content per bp:1.739
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.0 +/- 24.4bp
Average Position of motif in Background52.6 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ATAGGCAAAAGCAGCA
-ADGGYAGYAGCATCT
 C G T A G C A T T C G A T A C G C T A G A G T C C G T A T G C A T G C A C T G A A C T G A G T C C G T A A C T G A G T C G T C A
A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

MAFF/MA0495.1/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:forward strand
Alignment:ATAGGCAAAAGCAGCA------
----GCTGAGTCAGCAATTTTT
 C G T A G C A T T C G A T A C G C T A G A G T C C G T A T G C A T G C A C T G A A C T G A G T C C G T A A C T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ATAGGCAAAAGCAGCA
-AAAACAAAGG-----
 C G T A G C A T T C G A T A C G C T A G A G T C C G T A T G C A T G C A C T G A A C T G A G T C C G T A A C T G A G T C G T C A
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ATAGGCAAAAGCAGCA
---RACAAWGG-----
 C G T A G C A T T C G A T A C G C T A G A G T C C G T A T G C A T G C A C T G A A C T G A G T C C G T A A C T G A G T C G T C A
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:forward strand
Alignment:ATAGGCAAAAGCAGCA----
-----CTGAGTCAGCAATTT
 C G T A G C A T T C G A T A C G C T A G A G T C C G T A T G C A T G C A C T G A A C T G A G T C C G T A A C T G A G T C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:ATAGGCAAAAGCAGCA
---TGGAACAGMA---
 C G T A G C A T T C G A T A C G C T A G A G T C C G T A T G C A T G C A C T G A A C T G A G T C C G T A A C T G A G T C G T C A
A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:ATAGGCAAAAGCAGCA
---AACAAAGG-----
 C G T A G C A T T C G A T A C G C T A G A G T C C G T A T G C A T G C A C T G A A C T G A G T C C G T A A C T G A G T C G T C A
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:ATAGGCAAAAGCAGCA---
---ATTTACAGTAGCAAAA
 C G T A G C A T T C G A T A C G C T A G A G T C C G T A T G C A T G C A C T G A A C T G A G T C C G T A A C T G A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:ATAGGCAAAAGCAGCA
----NNAGCAGCTGCT
 C G T A G C A T T C G A T A C G C T A G A G T C C G T A T G C A T G C A C T G A A C T G A G T C C G T A A C T G A G T C G T C A
A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:ATAGGCAAAAGCAGCA
ATATGCAAATNNN---
 C G T A G C A T T C G A T A C G C T A G A G T C C G T A T G C A T G C A C T G A A C T G A G T C C G T A A C T G A G T C G T C A
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T