Information for 14-CATAGAGTATGCA (Motif 24)

A G T C C G T A A C G T C G T A A T C G C G T A A T C G A C G T C G T A A C G T A C T G A T G C C T G A
Reverse Opposite:
A G C T A T C G A G T C C G T A A C G T C G T A A T G C C G A T A T G C A C G T C G T A A C G T A C T G
p-value:1e-6
log p-value:-1.476e+01
Information Content per bp:1.910
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.8 +/- 23.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU4F1/MA0790.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CATAGAGTATGCA-
CATTAATTATTCAT
 A G T C C G T A A C G T C G T A A T C G C G T A A T C G A C G T C G T A A C G T A C T G A T G C C T G A A C G T
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

POU4F3/MA0791.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CATAGAGTATGCA-
CTCATTAATTATGCAT
 A C G T A C G T A G T C C G T A A C G T C G T A A T C G C G T A A T C G A C G T C G T A A C G T A C T G A T G C C T G A A C G T
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

POU4F2/MA0683.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CATAGAGTATGCA-
CTCATTAATTATGCAT
 A C G T A C G T A G T C C G T A A C G T C G T A A T C G C G T A A T C G A C G T C G T A A C G T A C T G A T G C C T G A A C G T
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T

PH0148.1_Pou3f3/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CATAGAGTATGCA------
--TNNATTATGCATANNTT
 A G T C C G T A A C G T C G T A A T C G C G T A A T C G A C G T C G T A A C G T A C T G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CATAGAGTATGCA-
WYATGCATWATGCAT
 A C G T A G T C C G T A A C G T C G T A A T C G C G T A A T C G A C G T C G T A A C G T A C T G A T G C C T G A A C G T
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CATAGAGTATGCA-
----GHATATKCAT
 A G T C C G T A A C G T C G T A A T C G C G T A A T C G A C G T C G T A A C G T A C T G A T G C C T G A A C G T
A C G T A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CATAGAGTATGCA-
TCATGAATWATTCAT
 A C G T A G T C C G T A A C G T C G T A A T C G C G T A A T C G A C G T C G T A A C G T A C T G A T G C C T G A A C G T
G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CATAGAGTATGCA-
----GAATATTCAT
 A G T C C G T A A C G T C G T A A T C G C G T A A T C G A C G T C G T A A C G T A C T G A T G C C T G A A C G T
A C G T A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CATAGAGTATGCA-
--TGAATTATGCAT
 A G T C C G T A A C G T C G T A A T C G C G T A A T C G A C G T C G T A A C G T A C T G A T G C C T G A A C G T
A C G T A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

POU2F1/MA0785.1/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CATAGAGTATGCA----
-----AATATGCAAATT
 A G T C C G T A A C G T C G T A A T C G C G T A A T C G A C G T C G T A A C G T A C T G A T G C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T