Information for 1-ACAAACGCCA (Motif 9)

C G T A T A G C C T G A T C G A C G T A T A G C T A C G T A G C G T A C C T G A
Reverse Opposite:
A G C T A C T G A T C G A T G C A T C G A C G T A G C T A G C T A T C G C G A T
p-value:1e-9
log p-value:-2.280e+01
Information Content per bp:1.747
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.05%
Number of Background Sequences with motif233.3
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets50.6 +/- 24.8bp
Average Position of motif in Background49.8 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ACAAACGCCA
AAAACAAAGG---
 A C G T A C G T A C G T C G T A T A G C C T G A T C G A C G T A T A G C T A C G T A G C G T A C C T G A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ACAAACGCCA-
-CAAAGGTCAG
 C G T A T A G C C T G A T C G A C G T A T A G C T A C G T A G C G T A C C T G A A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACAAACGCCA
RACAAWGG---
 A C G T C G T A T A G C C T G A T C G A C G T A T A G C T A C G T A G C G T A C C T G A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ACAAACGCCA
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T C G T A T A G C C T G A T C G A C G T A T A G C T A C G T A G C G T A C C T G A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACAAACGCCA
AACAAAGG---
 A C G T C G T A T A G C C T G A T C G A C G T A T A G C T A C G T A G C G T A C C T G A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------ACAAACGCCA-
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C C T G A T C G A C G T A T A G C T A C G T A G C G T A C C T G A A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ACAAACGCCA
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C C T G A T C G A C G T A T A G C T A C G T A G C G T A C C T G A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACAAACGCCA
RNAACAATGG---
 A C G T A C G T A C G T C G T A T A G C C T G A T C G A C G T A T A G C T A C G T A G C G T A C C T G A
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACAAACGCCA
GGAACAAAGR---
 A C G T A C G T A C G T C G T A T A G C C T G A T C G A C G T A T A G C T A C G T A G C G T A C C T G A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACAAACGCCA
VRRACAAWGG---
 A C G T A C G T A C G T C G T A T A G C C T G A T C G A C G T A T A G C T A C G T A G C G T A C C T G A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T