Information for 5-TGGCGACGGA (Motif 22)

A C G T A C T G C T A G A G T C A C T G C G T A A G T C A C T G C T A G C G T A
Reverse Opposite:
C G A T A G T C A G T C A C T G C G A T A G T C A C T G A G T C A G T C C G T A
p-value:1e-7
log p-value:-1.680e+01
Information Content per bp:1.916
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif24.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets42.0 +/- 18.0bp
Average Position of motif in Background51.3 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCGACGGA--
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A G T C A C T G C G T A A G T C A C T G C T A G C G T A A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCGACGGA--
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A G T C A C T G C G T A A G T C A C T G C T A G C G T A A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0179.1_Sp100_2/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCGACGGA
NNTTTANNCGACGNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A G T C A C T G C G T A A G T C A C T G C T A G C G T A
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TGGCGACGGA--
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A G T C A C T G C G T A A G T C A C T G C T A G C G T A A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGGCGACGGA
CCGCATAGCAACGGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A G T C A C T G C G T A A G T C A C T G C T A G C G T A
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGGCGACGGA
NTTGGCANN---
 A C G T A C G T A C G T A C T G C T A G A G T C A C T G C G T A A G T C A C T G C T A G C G T A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGGCGACGGA
TACCATAGCAACGGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A G T C A C T G C G T A A G T C A C T G C T A G C G T A
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGGCGACGGA
TTGGCA-----
 A C G T A C G T A C T G C T A G A G T C A C T G C G T A A G T C A C T G C T A G C G T A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGGCGACGGA
TTTGGCGCCAAA
 A C G T A C G T A C G T A C T G C T A G A G T C A C T G C G T A A G T C A C T G C T A G C G T A
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

YY2/MA0748.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGGCGACGGA
TAATGGCGGNC--
 A C G T A C G T A C G T A C G T A C T G C T A G A G T C A C T G C G T A A G T C A C T G C T A G C G T A
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T