Information for 1-CAGGGGTCCCCGGTGG (Motif 1)

A T G C G T C A A C T G A T C G C T A G C T A G A C G T A G T C A T G C G T A C A T G C A C T G A C T G A C G T A C T G T A C G
Reverse Opposite:
A T G C G T A C G T C A A G T C A G T C A T C G A C T G A T C G A C T G C G T A A G T C A G T C A T G C A G T C A C G T A T C G
p-value:1e-12
log p-value:-2.911e+01
Information Content per bp:1.791
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.9 +/- 14.5bp
Average Position of motif in Background43.5 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAGGGGTCCCCGGTGG
--GGGGCCCAAGGGGG
 A T G C G T C A A C T G A T C G C T A G C T A G A C G T A G T C A T G C G T A C A T G C A C T G A C T G A C G T A C T G T A C G
A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CAGGGGTCCCCGGTGG
----NGTCCCNNGGGA
 A T G C G T C A A C T G A T C G C T A G C T A G A C G T A G T C A T G C G T A C A T G C A C T G A C T G A C G T A C T G T A C G
A C G T A C G T A C G T A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CAGGGGTCCCCGGTGG
------TCCCCA----
 A T G C G T C A A C T G A T C G C T A G C T A G A C G T A G T C A T G C G T A C A T G C A C T G A C T G A C G T A C T G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAGGGGTCCCCGGTGG
GGCGAGGGGTCAAGGGC--
 A C G T A C G T A C G T A T G C G T C A A C T G A T C G C T A G C T A G A C G T A G T C A T G C G T A C A T G C A C T G A C T G A C G T A C T G T A C G
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CAGGGGTCCCCGGTGG--
------TCCCCTGGGGAC
 A T G C G T C A A C T G A T C G C T A G C T A G A C G T A G T C A T G C G T A C A T G C A C T G A C T G A C G T A C T G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAGGGGTCCCCGGTGG
CAAAGGTCAAGGG---
 A T G C G T C A A C T G A T C G C T A G C T A G A C G T A G T C A T G C G T A C A T G C A C T G A C T G A C G T A C T G T A C G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CAGGGGTCCCCGGTGG
CTCCAGGGGTCAATTGA--
 A C G T A C G T A C G T A T G C G T C A A C T G A T C G C T A G C T A G A C G T A G T C A T G C G T A C A T G C A C T G A C T G A C G T A C T G T A C G
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAGGGGTCCCCGGTGG---
GGAGCTGTCCATGGTGCTGA
 A C G T A T G C G T C A A C T G A T C G C T A G C T A G A C G T A G T C A T G C G T A C A T G C A C T G A C T G A C G T A C T G T A C G A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGGTCCCCGGTGG----
GGCGCTGTCCATGGTGCTGAA
 A C G T A T G C G T C A A C T G A T C G C T A G C T A G A C G T A G T C A T G C G T A C A T G C A C T G A C T G A C G T A C T G T A C G A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CAGGGGTCCCCGGTGG---
----CCCCCCCGGGGGGGT
 A T G C G T C A A C T G A T C G C T A G C T A G A C G T A G T C A T G C G T A C A T G C A C T G A C T G A C G T A C T G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T