Homer de novo Motif Results (hs_NeuroectodermalSphereCell_NEC_normal_P300_SRX027490_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 908
Total background sequences = 46939
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G C T T C G A A T C G A G C T A C T G T G A C A G T C G T C A G A T C G T A C G C A T C T G A A T C G A C G T A T C G A T C G 1e-235-5.426e+0218.39%0.30%18.8bp (27.2bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.958)
More Information | Similar Motifs Found
motif file (matrix)
2 A C G T A G T C C G T A C T A G T G A C C G T A A G T C A G T C G T C A G A C T A C T G A C T G G T C A A T G C C G T A A C T G 1e-23-5.348e+011.21%0.01%24.2bp (17.6bp)REST/MA0138.2/Jaspar(0.939)
More Information | Similar Motifs Found
motif file (matrix)
3 C A G T T C A G T C G A C T G A A G T C G T C A T C G A C G T A T C A G T C A G 1e-17-4.083e+017.71%2.25%25.1bp (28.8bp)Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer(0.913)
More Information | Similar Motifs Found
motif file (matrix)
4 A G T C A G C T G T C A G T C A C G A T A C G T C G T A C T A G A C G T A G C T 1e-16-3.710e+019.36%3.36%30.4bp (30.5bp)LHX6/MA0658.1/Jaspar(0.933)
More Information | Similar Motifs Found
motif file (matrix)
5 C A T G A G T C G T C A A C T G A C T G A C T G C G T A G T C A A C T G A C T G G T A C C G T A G T A C 1e-14-3.354e+010.88%0.01%30.0bp (9.6bp)ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer(0.607)
More Information | Similar Motifs Found
motif file (matrix)
6 A C G T C G A T C G T A T A G C G T C A G T A C G C T A G C T A T A G C C G T A 1e-12-2.980e+018.48%3.28%26.1bp (30.5bp)PB0120.1_Foxj1_2/Jaspar(0.717)
More Information | Similar Motifs Found
motif file (matrix)
7 G C T A G A C T C G T A T A C G G T A C C T G A T A C G A C T G A C T G C T G A 1e-12-2.892e+016.39%2.11%27.2bp (27.9bp)PB0091.1_Zbtb3_1/Jaspar(0.682)
More Information | Similar Motifs Found
motif file (matrix)
8 A G T C C T A G A T C G A G T C A C T G A G T C A G T C G T A C A C G T T A G C 1e-12-2.878e+012.31%0.28%20.7bp (29.8bp)POL006.1_BREu/Jaspar(0.762)
More Information | Similar Motifs Found
motif file (matrix)
9 A G C T C T A G A G T C C G A T C T A G A T C G G T C A C T A G G T C A G T C A A G T C G T C A T C G A C G A T C T G A C T A G 1e-12-2.860e+010.77%0.01%22.3bp (21.3bp)Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer(0.627)
More Information | Similar Motifs Found
motif file (matrix)
10 * C G T A C T A G T A C G A C G T A T C G C A G T A T G C C T G A T A C G A G T C A G T C A G C T A G C T 1e-11-2.744e+011.43%0.08%27.2bp (23.7bp)Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer(0.696)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C T G C G T A A T C G A G T C A G C T A T G C A G T C A G T C A C T G T G C A A T G C A C G T A G T C 1e-11-2.683e+010.88%0.02%23.1bp (23.9bp)PB0025.1_Glis2_1/Jaspar(0.593)
More Information | Similar Motifs Found
motif file (matrix)
12 * T A C G A G T C G C T A A C T G G A T C C G A T A C T G G T A C G T C A C A T G A G T C T A G C C G A T A G T C A G C T A G T C 1e-11-2.660e+010.77%0.01%14.5bp (22.5bp)MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer(0.642)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C T G A T G C A G C T G C T A G T A C A C G T A C T G A C G T A G T C A G T C A C G T A C T G C T G A 1e-11-2.620e+010.66%0.01%18.6bp (21.7bp)THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer(0.662)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C G T A C G T A G T C G A T C A G T C C G T A A T C G A G T C A C G T A C T G A C G T A C T G A G T C 1e-11-2.620e+010.66%0.01%18.7bp (25.0bp)Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer(0.735)
More Information | Similar Motifs Found
motif file (matrix)
15 * C T A G A T G C C A G T T C G A G C T A C G A T G A T C T G A C G T A C G T A C 1e-11-2.535e+015.29%1.68%27.5bp (28.2bp)PH0139.1_Pitx3/Jaspar(0.908)
More Information | Similar Motifs Found
motif file (matrix)
16 * C G T A A C T G G C T A C T G A T G C A T A G C C G T A C G T A C G A T A C T G C T A G T G C A A C T G A C T G T C A G C T G A 1e-10-2.505e+010.77%0.01%15.7bp (10.4bp)Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer(0.733)
More Information | Similar Motifs Found
motif file (matrix)
17 * A G T C A G T C C T A G A C T G A C T G C T A G C G T A A C T G A C T G C G T A A C T G A C T G C T G A G T C A C G T A A C G T 1e-10-2.459e+010.55%0.00%19.0bp (0.0bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.644)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C T G C T G A C G T A A G T C C G T A A G T C A C T G A G T C C G T A G T A C C G T A A T G C A G T C A C G T A C T G A G T C 1e-10-2.459e+010.55%0.00%23.5bp (0.0bp)ZEB1/MA0103.2/Jaspar(0.658)
More Information | Similar Motifs Found
motif file (matrix)
19 * C T G A T C G A C T G A C A T G G T A C C T A G A C T G A G T C A C G T C G A T 1e-10-2.349e+017.49%3.11%25.7bp (31.1bp)GRHL1/MA0647.1/Jaspar(0.663)
More Information | Similar Motifs Found
motif file (matrix)
20 * A G T C A G T C C G A T G A T C A G T C A G C T A C T G A T C G C G A T A C T G G T C A A G T C G T A C 1e-9-2.229e+011.43%0.12%23.4bp (22.4bp)CTCF/MA0139.1/Jaspar(0.642)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C T G A C T G C G T A C G T A G T A C A G T C A C G T A C T G A G T C C G T A A C T G C T A G A G T C 1e-9-2.208e+010.66%0.01%24.2bp (36.0bp)Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer(0.621)
More Information | Similar Motifs Found
motif file (matrix)
22 * A C G T G C T A A G T C A C G T A C G T A G C T A T C G A C G T A G T C G T C A A C G T A C G T C G T A 1e-9-2.208e+010.66%0.01%23.6bp (30.5bp)SPIC/MA0687.1/Jaspar(0.639)
More Information | Similar Motifs Found
motif file (matrix)
23 * A G C T A C G T C A G T T G C A C G T A C T G A C A T G C T A G C A T G A G T C 1e-8-1.951e+015.07%1.88%26.9bp (30.2bp)Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer(0.674)
More Information | Similar Motifs Found
motif file (matrix)
24 * A C G T A T G C C G T A A G T C C G T A A T C G A C G T A C T G A C G T A C T G C G T A C T A G A C G T 1e-8-1.902e+010.44%0.00%28.7bp (0.0bp)PB0132.1_Hbp1_2/Jaspar(0.644)
More Information | Similar Motifs Found
motif file (matrix)