Information for 6-WGAAACAATGGMGGGA (Motif 16)

C G T A A C T G G C T A C T G A T G C A T A G C C G T A C G T A C G A T A C T G C T A G T G C A A C T G A C T G T C A G C T G A
Reverse Opposite:
A G C T A G T C A G T C T A G C A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T C A G T A G T C G C A T
p-value:1e-10
log p-value:-2.505e+01
Information Content per bp:1.730
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.6 +/- 15.7bp
Average Position of motif in Background16.8 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:WGAAACAATGGMGGGA
-VRAACAATGG-----
 C G T A A C T G G C T A C T G A T G C A T A G C C G T A C G T A C G A T A C T G C T A G T G C A A C T G A C T G T C A G C T G A
A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:WGAAACAATGGMGGGA
-AAAACAATGG-----
 C G T A A C T G G C T A C T G A T G C A T A G C C G T A C G T A C G A T A C T G C T A G T G C A A C T G A C T G T C A G C T G A
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:3
Score:0.73
Offset:2
Orientation:forward strand
Alignment:WGAAACAATGGMGGGA
--RAACAATGGN----
 C G T A A C T G G C T A C T G A T G C A T A G C C G T A C G T A C G A T A C T G C T A G T G C A A C T G A C T G T C A G C T G A
A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:WGAAACAATGGMGGGA
--GAACAATGGN----
 C G T A A C T G G C T A C T G A T G C A T A G C C G T A C G T A C G A T A C T G C T A G T G C A A C T G A C T G T C A G C T G A
A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:WGAAACAATGGMGGGA
---AACAAAGG-----
 C G T A A C T G G C T A C T G A T G C A T A G C C G T A C G T A C G A T A C T G C T A G T G C A A C T G A C T G T C A G C T G A
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:WGAAACAATGGMGGGA
---RACAAWGG-----
 C G T A A C T G G C T A C T G A T G C A T A G C C G T A C G T A C G A T A C T G C T A G T G C A A C T G A C T G T C A G C T G A
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:WGAAACAATGGMGGGA
--GAACAATGG-----
 C G T A A C T G G C T A C T G A T G C A T A G C C G T A C G T A C G A T A C T G C T A G T G C A A C T G A C T G T C A G C T G A
A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:WGAAACAATGGMGGGA
-VRRACAAWGG-----
 C G T A A C T G G C T A C T G A T G C A T A G C C G T A C G T A C G A T A C T G C T A G T G C A A C T G A C T G T C A G C T G A
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-WGAAACAATGGMGGGA
CTCACACAATGGCGC--
 A C G T C G T A A C T G G C T A C T G A T G C A T A G C C G T A C G T A C G A T A C T G C T A G T G C A A C T G A C T G T C A G C T G A
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:WGAAACAATGGMGGGA
-RNAACAATGG-----
 C G T A A C T G G C T A C T G A T G C A T A G C C G T A C G T A C G A T A C T G C T A G T G C A A C T G A C T G T C A G C T G A
A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T