Information for 10-AAAGCGGCTT (Motif 19)

C T G A T C G A C T G A C A T G G T A C C T A G A C T G A G T C A C G T C G A T
Reverse Opposite:
G C T A G T C A T C A G T G A C G A T C C A T G G T A C G A C T A G C T G A C T
p-value:1e-10
log p-value:-2.349e+01
Information Content per bp:1.656
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif7.49%
Number of Background Sequences with motif1472.7
Percentage of Background Sequences with motif3.11%
Average Position of motif in Targets43.2 +/- 25.7bp
Average Position of motif in Background50.0 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAAGCGGCTT-
AAAACCGGTTTT
 A C G T C T G A T C G A C T G A C A T G G T A C C T A G A C T G A G T C A C G T C G A T A C G T
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAAGCGGCTT
AAACCGGTTT
 C T G A T C G A C T G A C A T G G T A C C T A G A C T G A G T C A C G T C G A T
T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

Crx/MA0467.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAAGCGGCTT--
-AAGAGGATTAG
 C T G A T C G A C T G A C A T G G T A C C T A G A C T G A G T C A C G T C G A T A C G T A C G T
A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PH0126.1_Obox6/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAAGCGGCTT----
AAAAACGGATTATTG
 A C G T C T G A T C G A C T G A C A T G G T A C C T A G A C T G A G T C A C G T C G A T A C G T A C G T A C G T A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

PROX1/MA0794.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAAGCGGCTT-
TAAGGCGTCTTG
 A C G T C T G A T C G A C T G A C A T G G T A C C T A G A C T G A G T C A C G T C G A T A C G T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

KLF13/MA0657.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AAAGCGGCTT-----
CAAAAAGGGGCGTGGCAT
 A C G T A C G T A C G T C T G A T C G A C T G A C A T G G T A C C T A G A C T G A G T C A C G T C G A T A C G T A C G T A C G T A C G T A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

PH0115.1_Nkx2-6/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AAAGCGGCTT-
AATNTTAAGTGGNTNN
 A C G T A C G T A C G T A C G T A C G T C T G A T C G A C T G A C A T G G T A C C T A G A C T G A G T C A C G T C G A T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AAAGCGGCTT-
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T C T G A T C G A C T G A C A T G G T A C C T A G A C T G A G T C A C G T C G A T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AAAGCGGCTT-
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T C T G A T C G A C T G A C A T G G T A C C T A G A C T G A G T C A C G T C G A T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AAAGCGGCTT-
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T A C G T A C G T C T G A T C G A C T G A C A T G G T A C C T A G A C T G A G T C A C G T C G A T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A