Information for 6-AGGTGTCAGCCTT (Motif 10)

C G T A C T A G T A C G A C G T A T C G C A G T A T G C C T G A T A C G A G T C A G T C A G C T A G C T
Reverse Opposite:
C T G A C T G A A C T G C T A G A G T C A G C T A T C G G T C A A T G C T C G A A G T C G A T C G C A T
p-value:1e-11
log p-value:-2.744e+01
Information Content per bp:1.762
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif38.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets57.2 +/- 27.2bp
Average Position of motif in Background48.2 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGGTGTCAGCCTT
AGGTGHCAGACA-
 C G T A C T A G T A C G A C G T A T C G C A G T A T G C C T G A T A C G A G T C A G T C A G C T A G C T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGGTGTCAGCCTT
-VBTGWCAGCB--
 C G T A C T A G T A C G A C G T A T C G C A G T A T G C C T G A T A C G A G T C A G T C A G C T A G C T
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGGTGTCAGCCTT
AGGTGTCA-----
 C G T A C T A G T A C G A C G T A T C G C A G T A T G C C T G A T A C G A G T C A G T C A G C T A G C T
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGGTGTCAGCCTT
AGGTGNCAGACAG
 C G T A C T A G T A C G A C G T A T C G C A G T A T G C C T G A T A C G A G T C A G T C A G C T A G C T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGTCAGCCTT
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T C G T A C T A G T A C G A C G T A T C G C A G T A T G C C T G A T A C G A G T C A G T C A G C T A G C T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGGTGTCAGCCTT
AGGTGTGA-----
 C G T A C T A G T A C G A C G T A T C G C A G T A T G C C T G A T A C G A G T C A G T C A G C T A G C T
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGGTGTCAGCCTT
AGGTGTGA-----
 C G T A C T A G T A C G A C G T A T C G C A G T A T G C C T G A T A C G A G T C A G T C A G C T A G C T
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGTGTCAGCCTT
AGGTGTGAAM---
 C G T A C T A G T A C G A C G T A T C G C A G T A T G C C T G A T A C G A G T C A G T C A G C T A G C T
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGGTGTCAGCCTT--
---NGTCAGCANTTT
 C G T A C T A G T A C G A C G T A T C G C A G T A T G C C T G A T A C G A G T C A G T C A G C T A G C T A C G T A C G T
A C G T A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGTGTCAGCCTT
AGGTGTGA-----
 C G T A C T A G T A C G A C G T A T C G C A G T A T G C C T G A T A C G A G T C A G T C A G C T A G C T
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T