Homer de novo Motif Results (hs_NT2304_NT2304_undef_ER_SRX371432_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 613
Total background sequences = 46963
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C T G A C T G A C G T A G T C C G T A A G T C C A T G A T G C A C G T A T C G C G T A A G T C A G T C A G T C G T A C T G A C 1e-207-4.776e+0210.28%0.00%14.9bp (14.6bp)ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer(0.965)
More Information | Similar Motifs Found
motif file (matrix)
2 A C T G A C T G A G C T G T A C C G T A A C G T A T G C C G T A C T A G A C G T A G T C C G T A A T C G A G T C G A C T A C T G 1e-14-3.264e+010.98%0.00%26.8bp (0.0bp)Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer(0.687)
More Information | Similar Motifs Found
motif file (matrix)
3 A T C G C G T A C G T A G C T A A G C T C T A G A T C G T G A C A C G T A T C G C G T A A G T C C G T A A G T C C G A T A G C T 1e-14-3.264e+010.98%0.00%29.7bp (0.0bp)Mafb/MA0117.2/Jaspar(0.666)
More Information | Similar Motifs Found
motif file (matrix)
4 A G T C G T C A A C G T A G T C A G C T A G T C A C G T A T C G A C G T A T C G C A G T A C T G G A C T A T G C A G T C C G A T 1e-14-3.254e+011.31%0.01%15.1bp (22.1bp)PB0140.1_Irf6_2/Jaspar(0.534)
More Information | Similar Motifs Found
motif file (matrix)
5 A G C T A C G T T A C G C T A G A T G C A G T C C G T A A C T G A C T G A C G T 1e-13-3.195e+013.10%0.27%25.8bp (29.3bp)ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer(0.717)
More Information | Similar Motifs Found
motif file (matrix)
6 C A T G C T A G A G C T A T G C G T A C G C T A A C G T C T A G A C T G C G T A A C G T A T G C C G T A A G T C G T A C C G T A 1e-12-2.987e+011.31%0.01%24.5bp (31.4bp)DMRT3/MA0610.1/Jaspar(0.602)
More Information | Similar Motifs Found
motif file (matrix)
7 A C T G C G T A G A C T C T A G A C T G A G T C C G A T A C G T A G T C C G T A A C T G A C T G A C G T 1e-12-2.772e+011.14%0.01%18.4bp (30.1bp)IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer(0.633)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C T G C G T A C G A T A G C T C G T A A T C G A C G T C T G A C T A G A T G C C G T A A C T G A C G T 1e-11-2.651e+010.82%0.00%26.1bp (16.4bp)GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer(0.638)
More Information | Similar Motifs Found
motif file (matrix)
9 * G T A C A C G T A C T G A G T C C G T A A C T G T C G A C T G A C T A G C G A T T A C G A C G T A C T G A G T C C G A T A C T G 1e-11-2.651e+010.82%0.00%24.6bp (14.0bp)NRL/MA0842.1/Jaspar(0.583)
More Information | Similar Motifs Found
motif file (matrix)
10 * A G C T C G T A A C T G G A T C T G A C A G T C A C G T T C A G C G T A A C T G C A G T A G T C C G T A A T C G A G T C C G T A 1e-11-2.651e+010.82%0.00%27.1bp (0.0bp)MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer(0.777)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C T G A T C G C G T A C G T A T G A C A G T C A G T C G T A C A T G C A C G T G T A C A T C G A C T G A C T G A C T G C G T A 1e-11-2.651e+010.82%0.00%31.5bp (0.0bp)ZIC3/MA0697.1/Jaspar(0.594)
More Information | Similar Motifs Found
motif file (matrix)
12 * C A T G G C A T T A C G G T A C C G A T A C T G A G C T C T G A C G A T A T C G G A T C C G A T A G T C C G T A A C T G A G T C 1e-11-2.627e+011.96%0.10%26.0bp (36.1bp)NRL/MA0842.1/Jaspar(0.552)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C G T A C T G A T G C G T C A A C T G A G T C C G A T A C T G A C G T T C A G C T A G A G T C A G C T 1e-10-2.322e+011.47%0.05%22.6bp (27.5bp)Myod1/MA0499.1/Jaspar(0.670)
More Information | Similar Motifs Found
motif file (matrix)
14 * C A G T C T A G G T A C C T G A A C G T A T C G A C G T T C A G G T A C C G A T 1e-10-2.316e+014.24%0.87%26.9bp (39.7bp)Myc/MA0147.2/Jaspar(0.735)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C T G C G T A C T A G C G T A A C G T A T C G C G A T A C G T A G T C C G T A A C G T A C T G A C T G A C T G C G T A A G T C 1e-10-2.305e+010.82%0.01%27.4bp (0.0bp)MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer(0.616)
More Information | Similar Motifs Found
motif file (matrix)
16 * C G T A A C G T A C G T A G T C A G C T C G T A A G T C G T A C A G T C C G T A A G T C C G A T A G C T A T G C G T A C A C G T 1e-10-2.305e+010.82%0.00%23.9bp (1.1bp)ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer(0.684)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A A C T G A T C G T G C A C A G T C A T G A C T G C T G A G T C A C G T A C T A G A C G T C T A G C T A G T A C G C G T A 1e-9-2.174e+017.99%2.90%27.0bp (27.9bp)EWSR1-FLI1/MA0149.1/Jaspar(0.600)
More Information | Similar Motifs Found
motif file (matrix)
18 * A G T C C G T A A C T G A G T C A G T C A G T C A C G T A T C G A T C G A G T C A C G T A C G T A C G T 1e-8-2.061e+011.14%0.03%14.7bp (36.1bp)ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer(0.576)
More Information | Similar Motifs Found
motif file (matrix)
19 * C G T A A G T C A G T C C T G A C G T A A C T G A C T G C G T A A C G T A C G T 1e-8-2.055e+010.65%0.00%24.7bp (16.6bp)Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer(0.674)
More Information | Similar Motifs Found
motif file (matrix)
20 * A T C G G T C A C G T A T G A C A T G C A C T G C G T A A C T G A C G T T G A C 1e-8-1.911e+013.26%0.63%29.5bp (29.2bp)PB0153.1_Nr2f2_2/Jaspar(0.630)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C T G A C T G A C T G A G C T G T C A A C T G C T G A G T A C G T A C A C G T A G C T A C G T A C T G 1e-8-1.893e+010.98%0.02%25.1bp (26.9bp)HNF4G/MA0484.1/Jaspar(0.640)
More Information | Similar Motifs Found
motif file (matrix)
22 * T A G C A G T C G T C A G T A C T G C A A T C G C G A T T A C G A C G T G T C A T A C G A C G T G A T C A C G T G C T A A G T C 1e-8-1.893e+010.98%0.02%27.9bp (28.6bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.509)
More Information | Similar Motifs Found
motif file (matrix)
23 * A C G T A G T C A G T C A C G T A C T G A G T C G C A T C T G A A C G T T G A C C T G A A T G C A T G C G A C T A T G C A G C T 1e-8-1.850e+010.82%0.01%17.5bp (1.8bp)SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer(0.636)
More Information | Similar Motifs Found
motif file (matrix)
24 * C G T A A C G T A C G T C G T A A C T G A G T C A G T C A G T C C G A T A T C G 1e-7-1.837e+010.98%0.03%17.9bp (20.6bp)RHOXF1/MA0719.1/Jaspar(0.621)
More Information | Similar Motifs Found
motif file (matrix)
25 * A C G T A C T G C G T A T G A C C G T A A C T G A G T C A C G T A G T C A G T C C G T A C G A T C T G A 1e-7-1.779e+010.65%0.01%32.3bp (9.8bp)PH0102.1_Meis1/Jaspar(0.749)
More Information | Similar Motifs Found
motif file (matrix)
26 * C T G A A G T C A G T C A G C T G T A C C G A T G T A C T G A C A G C T A C G T A C T G A T G C A G C T 1e-7-1.687e+011.79%0.19%22.9bp (28.0bp)PB0099.1_Zfp691_1/Jaspar(0.548)
More Information | Similar Motifs Found
motif file (matrix)
27 * C T A G C G A T C G T A A C G T C G T A T G A C A G T C A G C T C T A G A T C G 1e-7-1.665e+012.12%0.30%30.4bp (30.8bp)ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer(0.703)
More Information | Similar Motifs Found
motif file (matrix)
28 * C G T A G A C T G T C A C G T A A G T C C G T A A C G T T A C G G C A T A C G T C T G A A C G T T G C A 1e-7-1.655e+010.98%0.03%31.3bp (30.2bp)PH0085.1_Irx4/Jaspar(0.670)
More Information | Similar Motifs Found
motif file (matrix)
29 * G C A T G C A T A G T C G A T C G A T C A G C T A C G T A G T C A G T C T G A C 1e-6-1.491e+0125.12%17.10%29.0bp (28.3bp)ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer(0.799)
More Information | Similar Motifs Found
motif file (matrix)
30 * C T A G T C A G C T A G C T G A C T A G A C T G T A C G C G T A C T G A T G C A C T G A A T C G C T G A T C G A C G T A T A C G 1e-5-1.349e+011.47%0.17%24.5bp (26.2bp)IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer(0.638)
More Information | Similar Motifs Found
motif file (matrix)
31 * G T C A A C T G A C T G A C T G A C T G C G T A C G A T A C G T C G T A A T G C 1e-3-8.293e+001.47%0.33%27.0bp (29.3bp)Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer(0.782)
More Information | Similar Motifs Found
motif file (matrix)