Information for 5-ACCAAGGATT (Motif 19)

C G T A A G T C A G T C C T G A C G T A A C T G A C T G C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A G T C A G T C A C G T A G C T A C T G A C T G A C G T
p-value:1e-8
log p-value:-2.055e+01
Information Content per bp:1.964
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.5 +/- 24.7bp
Average Position of motif in Background37.2 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ACCAAGGATT---
---VRGGATTARN
 C G T A A G T C A G T C C T G A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------ACCAAGGATT
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G T C C T G A C G T A A C T G A C T G C G T A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:ACCAAGGATT--
----NGGATTAA
 C G T A A G T C A G T C C T G A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ACCAAGGATT-
---NGGGATTA
 C G T A A G T C A G T C C T G A C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:ACCAAGGATT--
----RGGATTAR
 C G T A A G T C A G T C C T G A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:ACCAAGGATT--
----GGGATTAA
 C G T A A G T C A G T C C T G A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:ACCAAGGATT---
----GGGATTANN
 C G T A A G T C A G T C C T G A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

GSC/MA0648.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACCAAGGATT---
---NNGGATTAGN
 C G T A A G T C A G T C C T G A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:ACCAAGGATT---
-----GGATTAGC
 C G T A A G T C A G T C C T G A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ACCAAGGATT--
----CGGATTAN
 C G T A A G T C A G T C C T G A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A