Information for 3-GATTAGTAGCAGT (Motif 8)

A C T G C G T A C G A T A G C T C G T A A T C G A C G T C T G A C T A G A T G C C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C G C A T T A C G A G T C A G C T G T C A A T G C A C G T C T G A C G T A A C G T A G T C
p-value:1e-11
log p-value:-2.651e+01
Information Content per bp:1.821
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.0 +/- 26.1bp
Average Position of motif in Background31.5 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GATTAGTAGCAGT
RGGATTAR-------
 A C G T A C G T A C T G C G T A C G A T A G C T C G T A A T C G A C G T C T G A C T A G A T G C C G T A A C T G A C G T
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GATTAGTAGCAGT
GNGGATTAGN------
 A C G T A C G T A C G T A C T G C G T A C G A T A G C T C G T A A T C G A C G T C T G A C T A G A T G C C G T A A C T G A C G T
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GATTAGTAGCAGT
NNGGATTAGN------
 A C G T A C G T A C G T A C T G C G T A C G A T A G C T C G T A A T C G A C G T C T G A C T A G A T G C C G T A A C T G A C G T
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GATTAGTAGCAGT
CGGATTAN-------
 A C G T A C G T A C T G C G T A C G A T A G C T C G T A A T C G A C G T C T G A C T A G A T G C C G T A A C T G A C G T
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------GATTAGTAGCAGT
TTGCCCGGATTAGG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G A T A G C T C G T A A T C G A C G T C T G A C T A G A T G C C G T A A C T G A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GATTAGTAGCAGT
GGATTAGC------
 A C G T A C T G C G T A C G A T A G C T C G T A A T C G A C G T C T G A C T A G A T G C C G T A A C T G A C G T
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GATTAGTAGCAGT
NGGATTAA-------
 A C G T A C G T A C T G C G T A C G A T A G C T C G T A A T C G A C G T C T G A C T A G A T G C C G T A A C T G A C G T
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GATTAGTAGCAGT
GGGATTANN------
 A C G T A C G T A C T G C G T A C G A T A G C T C G T A A T C G A C G T C T G A C T A G A T G C C G T A A C T G A C G T
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GATTAGTAGCAGT
GGGATTAA-------
 A C G T A C G T A C T G C G T A C G A T A G C T C G T A A T C G A C G T C T G A C T A G A T G C C G T A A C T G A C G T
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GATTAGTAGCAGT
VRGGATTARN------
 A C G T A C G T A C G T A C T G C G T A C G A T A G C T C G T A A T C G A C G T C T G A C T A G A T G C C G T A A C T G A C G T
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T A C G T A C G T A C G T