Information for 11-AGGGGATTAC (Motif 31)

G T C A A C T G A C T G A C T G A C T G C G T A C G A T A C G T C G T A A T G C
Reverse Opposite:
A T C G A C G T C G T A C G T A G C A T A G T C A G T C G T A C T G A C A C G T
p-value:1e-3
log p-value:-8.293e+00
Information Content per bp:1.785
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif155.9
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets55.6 +/- 27.0bp
Average Position of motif in Background52.8 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:AGGGGATTAC
-NGGGATTA-
 G T C A A C T G A C T G A C T G A C T G C G T A C G A T A C G T C G T A A T G C
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

PITX3/MA0714.1/Jaspar

Match Rank:2
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:AGGGGATTAC-
--GGGATTANN
 G T C A A C T G A C T G A C T G A C T G C G T A C G A T A C G T C G T A A T G C A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Pitx1/MA0682.1/Jaspar

Match Rank:3
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:AGGGGATTAC
--GGGATTAA
 G T C A A C T G A C T G A C T G A C T G C G T A C G A T A C G T C G T A A T G C
A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

Crx/MA0467.1/Jaspar

Match Rank:4
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-AGGGGATTAC
AAGAGGATTAG
 A C G T G T C A A C T G A C T G A C T G A C T G C G T A C G A T A C G T C G T A A T G C
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AGGGGATTAC-
-VRGGATTARN
 G T C A A C T G A C T G A C T G A C T G C G T A C G A T A C G T C G T A A T G C A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AGGGGATTAC
--RGGATTAR
 G T C A A C T G A C T G A C T G A C T G C G T A C G A T A C G T C G T A A T G C
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AGGGGATTAC-
-NNGGATTAGN
 G T C A A C T G A C T G A C T G A C T G C G T A C G A T A C G T C G T A A T G C A C G T
A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

PH0015.1_Crx/Jaspar

Match Rank:8
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AGGGGATTAC---
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T G T C A A C T G A C T G A C T G A C T G C G T A C G A T A C G T C G T A A T G C A C G T A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:AGGGGATTAC-
---GGATTAGC
 G T C A A C T G A C T G A C T G A C T G C G T A C G A T A C G T C G T A A T G C A C G T
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

PH0121.1_Obox1/Jaspar

Match Rank:10
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AGGGGATTAC----
TTAAGGGGATTAACTAC
 A C G T A C G T A C G T G T C A A C T G A C T G A C T G A C T G C G T A C G A T A C G T C G T A A T G C A C G T A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C