Information for 5-SAAATGGCTGACWCTT (Motif 3)

A T C G C G T A C G T A G C T A A G C T C T A G A T C G T G A C A C G T A T C G C G T A A G T C C G T A A G T C C G A T A G C T
Reverse Opposite:
T C G A C G T A A C T G C G A T A C T G A C G T A T G C C G T A A C T G A T G C A G T C C T G A C G A T G C A T A C G T A T G C
p-value:1e-14
log p-value:-3.264e+01
Information Content per bp:1.763
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.7 +/- 29.7bp
Average Position of motif in Background35.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mafb/MA0117.2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:SAAATGGCTGACWCTT
-AAAATGCTGACT---
 A T C G C G T A C G T A G C T A A G C T C T A G A T C G T G A C A C G T A T C G C G T A A G T C C G T A A G T C C G A T A G C T
A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:SAAATGGCTGACWCTT
-AAANTGCTGACTNAG
 A T C G C G T A C G T A G C T A A G C T C T A G A T C G T G A C A C G T A T C G C G T A A G T C C G T A A G T C C G A T A G C T
A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

PB0042.1_Mafk_1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-SAAATGGCTGACWCTT
TAAAAATGCTGACTT--
 A C G T A T C G C G T A C G T A G C T A A G C T C T A G A T C G T G A C A C G T A T C G C G T A A G T C C G T A A G T C C G A T A G C T
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:SAAATGGCTGACWCTT
AAAWWTGCTGACWWD-
 A T C G C G T A C G T A G C T A A G C T C T A G A T C G T G A C A C G T A T C G C G T A A G T C C G T A A G T C C G A T A G C T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G A C G T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:5
Score:0.62
Offset:5
Orientation:forward strand
Alignment:SAAATGGCTGACWCTT-
-----GGATGACTCATC
 A T C G C G T A C G T A G C T A A G C T C T A G A T C G T G A C A C G T A T C G C G T A A G T C C G T A A G T C C G A T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:SAAATGGCTGACWCTT
----TGTCTGDCACCT
 A T C G C G T A C G T A G C T A A G C T C T A G A T C G T G A C A C G T A T C G C G T A A G T C C G T A A G T C C G A T A G C T
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

MAFF/MA0495.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-SAAATGGCTGACWCTT-
NAAAANTGCTGACTCAGC
 A C G T A T C G C G T A C G T A G C T A A G C T C T A G A T C G T G A C A C G T A T C G C G T A A G T C C G T A A G T C C G A T A G C T A C G T
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:SAAATGGCTGACWCTT
-AATTTGCTGAC----
 A T C G C G T A C G T A G C T A A G C T C T A G A T C G T G A C A C G T A T C G C G T A A G T C C G T A A G T C C G A T A G C T
A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:SAAATGGCTGACWCTT
-----TGCTGACTCA-
 A T C G C G T A C G T A G C T A A G C T C T A G A T C G T G A C A C G T A T C G C G T A A G T C C G T A A G T C C G A T A G C T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:SAAATGGCTGACWCTT
---CTGTCTGTCACCT
 A T C G C G T A C G T A G C T A A G C T C T A G A T C G T G A C A C G T A T C G C G T A A G T C C G T A A G T C C G A T A G C T
A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T