Homer de novo Motif Results (hs_Lymphoblastoid_GM10847_undef_RPB2_ERX329713_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 656
Total background sequences = 49413
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * A C G T A G C T A C G T A C G T A G T C A C G T G T A C C G T A C T A G C G T A A G T C C G T A A G T C 1e-11-2.720e+011.98%0.11%23.2bp (26.8bp)Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer(0.597)
More Information | Similar Motifs Found
motif file (matrix)
2 * A T G C C G A T A C T G G T A C C G T A C G A T A T C G C T G A C T A G C G A T G T C A A C G T C T A G C G T A A C G T A C G T 1e-11-2.692e+011.22%0.02%25.9bp (21.1bp)MF0010.1_Homeobox_class/Jaspar(0.550)
More Information | Similar Motifs Found
motif file (matrix)
3 * C T A G C G T A A G T C A C G T G T A C C G T A C G T A A C T G C G A T C G T A A C T G C T A G A C G T 1e-11-2.642e+010.76%0.00%24.5bp (0.0bp)PH0114.1_Nkx2-5/Jaspar(0.641)
More Information | Similar Motifs Found
motif file (matrix)
4 * A C T G A T G C G T A C T A G C C G T A A C T G A G C T C G T A A T C G G T C A A C T G C G T A A C T G A G T C A G T C A G T C 1e-11-2.642e+010.76%0.00%33.9bp (0.0bp)PB0133.1_Hic1_2/Jaspar(0.551)
More Information | Similar Motifs Found
motif file (matrix)
5 * A C T G A G T C G T C A A C G T A C T G A C G T A C T G A C T G A C T G C G T A A T G C A C G T A T G C 1e-11-2.598e+010.91%0.01%18.7bp (24.2bp)E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer(0.606)
More Information | Similar Motifs Found
motif file (matrix)
6 * A C T G G T C A C T G A G T C A C T G A A T C G C A T G A T C G G T A C T C G A 1e-10-2.532e+013.20%0.46%24.1bp (27.4bp)Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer(0.736)
More Information | Similar Motifs Found
motif file (matrix)
7 * C G A T A C T G C T G A A C T G G T C A A C G T A G C T A G T C A C G T A G T C G T A C G T C A C G A T 1e-10-2.435e+011.07%0.02%29.9bp (30.3bp)PB0139.1_Irf5_2/Jaspar(0.575)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C G T C T A G A G T C A G T C A C G T A C G T C G T A A C T G A T C G A C T G A C T G C G T A C G T A C T A G A T C G C G T A 1e-9-2.293e+010.91%0.01%23.1bp (23.5bp)SPIB/MA0081.1/Jaspar(0.575)
More Information | Similar Motifs Found
motif file (matrix)
9 * A T C G C T A G G T C A T A C G A G T C A T C G A T C G C G T A C G T A T A C G A G T C A C T G T A C G A G T C G T C A G C A T 1e-9-2.281e+011.07%0.02%17.1bp (24.7bp)Gabpa/MA0062.2/Jaspar(0.599)
More Information | Similar Motifs Found
motif file (matrix)
10 * A C T G A C G T C G T A C G T A C G T A A C T G A C G T C T A G C T G A A C T G C G T A A C T G A C T G 1e-8-2.049e+010.61%0.00%27.9bp (0.0bp)PRDM1/MA0508.1/Jaspar(0.623)
More Information | Similar Motifs Found
motif file (matrix)
11 * C G T A C G T A A C G T A C T G A C G T C G T A C T G A C T A G A T G C A G T C C G A T A C T G A C G T A G T C A C T G A G C T 1e-8-2.049e+010.61%0.00%30.6bp (11.7bp)PB0171.1_Sox18_2/Jaspar(0.552)
More Information | Similar Motifs Found
motif file (matrix)
12 * C G T A A C T G C A T G A G T C A C G T A G T C C T A G A C T G A G T C A G T C 1e-8-2.032e+012.90%0.49%23.9bp (27.1bp)ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.702)
More Information | Similar Motifs Found
motif file (matrix)
13 * C G A T A C G T T G A C A C G T A C T G A C G T A G T C A C G T T C A G C G A T 1e-8-1.955e+012.29%0.30%26.1bp (30.1bp)Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer(0.721)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C T G A C G T A C T G G A C T A T G C C G T A G C A T C G A T A C G T A T C G T A C G G C A T C T A G 1e-8-1.887e+012.29%0.32%27.2bp (28.2bp)Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer(0.603)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C T G A C T G G T A C G A T C A G T C A G C T C A G T C G T A A C T G A C T G 1e-7-1.789e+011.83%0.20%27.8bp (27.8bp)AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer(0.730)
More Information | Similar Motifs Found
motif file (matrix)
16 * A C G T A G C T C G T A A C G T C T G A A C T G A T G C A C G T A C T G G T A C 1e-7-1.748e+011.37%0.10%27.2bp (29.1bp)CDX2/MA0465.1/Jaspar(0.630)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A A G T C A G T C C G T A A C G T C G A T A C T G C G T A A C G T A C T G 1e-7-1.729e+010.91%0.03%25.2bp (25.6bp)PH0134.1_Pbx1/Jaspar(0.674)
More Information | Similar Motifs Found
motif file (matrix)
18 * C G T A A G T C C G T A A C G T C G T A A C T G A C G T A G T C C G T A A G T C 1e-5-1.270e+010.46%0.01%9.4bp (37.9bp)DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer(0.648)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C G T A T G C G T A C A G T C A T C G A G T C A C T G A C G T A C T G C G T A A G T C A C T G A C G T 1e-4-9.347e+000.30%0.00%16.5bp (0.0bp)Mitf/MA0620.1/Jaspar(0.750)
More Information | Similar Motifs Found
motif file (matrix)