Information for 6-TTATAGCTGC (Motif 16)

A C G T A G C T C G T A A C G T C T G A A C T G A T G C A C G T A C T G G T A C
Reverse Opposite:
A C T G A G T C C G T A A T C G G T A C A G C T G T C A C G A T C T G A G T C A
p-value:1e-7
log p-value:-1.748e+01
Information Content per bp:1.801
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif48.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets43.9 +/- 27.2bp
Average Position of motif in Background47.4 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTATAGCTGC
TTTTATGGCTN-
 A C G T A C G T A C G T A G C T C G T A A C G T C T G A A C T G A T G C A C G T A C T G G T A C
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TTATAGCTGC
----NGCTN-
 A C G T A G C T C G T A A C G T C T G A A C T G A T G C A C G T A C T G G T A C
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

POL002.1_INR/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTATAGCTGC
--NNNANTGA
 A C G T A G C T C G T A A C G T C T G A A C T G A T G C A C G T A C T G G T A C
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

CDX1/MA0878.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTATAGCTGC
TTTTATTGC---
 A C G T A C G T A C G T A G C T C G T A A C G T C T G A A C T G A T G C A C G T A C T G G T A C
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:5
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------TTATAGCTGC
ANTAATTTTATGGCCGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C G T C T G A A C T G A T G C A C G T A C T G G T A C
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

PH0064.1_Hoxb9/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TTATAGCTGC
NGANTTTTATGGCTCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C G T C T G A A C T G A T G C A C G T A C T G G T A C
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TTATAGCTGC-
-----GCTGTG
 A C G T A G C T C G T A A C G T C T G A A C T G A T G C A C G T A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTATAGCTGC
-AACAGCTG-
 A C G T A G C T C G T A A C G T C T G A A C T G A T G C A C G T A C T G G T A C
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTATAGCTGC--
--HCAGCTGDTN
 A C G T A G C T C G T A A C G T C T G A A C T G A T G C A C G T A C T G G T A C A C G T A C G T
A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTATAGCTGC
NTTTTATGAC---
 A C G T A C G T A C G T A C G T A G C T C G T A A C G T C T G A A C T G A T G C A C G T A C T G G T A C
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T