Information for 9-TSCCSCGTGAYGK (Motif 19)

A C G T A T G C G T A C A G T C A T C G A G T C A C T G A C G T A C T G C G T A A G T C A C T G A C G T
Reverse Opposite:
T G C A A G T C C T A G A C G T A G T C G T C A A G T C A C T G A T G C A C T G A C T G A T C G C G T A
p-value:1e-4
log p-value:-9.347e+00
Information Content per bp:1.862
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.5 +/- 16.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mitf/MA0620.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:TSCCSCGTGAYGK
--NCACGTGACN-
 A C G T A T G C G T A C A G T C A T C G A G T C A C T G A C G T A C T G C G T A A G T C A C T G A C G T
A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TSCCSCGTGAYGK
--NCACGTGACN-
 A C G T A T G C G T A C A G T C A T C G A G T C A C T G A C G T A C T G C G T A A G T C A C T G A C G T
A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

TFE3/MA0831.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TSCCSCGTGAYGK
-ATCACGTGAC--
 A C G T A T G C G T A C A G T C A T C G A G T C A C T G A C G T A C T G C G T A A G T C A C T G A C G T
A C G T T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TSCCSCGTGAYGK
-KCCACGTGAC--
 A C G T A T G C G T A C A G T C A T C G A G T C A C T G A C G T A C T G C G T A A G T C A C T G A C G T
A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TSCCSCGTGAYGK
----NCGTGACN-
 A C G T A T G C G T A C A G T C A T C G A G T C A C T G A C G T A C T G C G T A A G T C A C T G A C G T
A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TSCCSCGTGAYGK
-ACCACGTGAC--
 A C G T A T G C G T A C A G T C A T C G A G T C A C T G A C G T A C T G C G T A A G T C A C T G A C G T
A C G T T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TSCCSCGTGAYGK
-NCCACGTG----
 A C G T A T G C G T A C A G T C A T C G A G T C A C T G A C G T A C T G C G T A A G T C A C T G A C G T
A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TSCCSCGTGAYGK
NGCANTCATGCGTGACG-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C A G T C A T C G A G T C A C T G A C G T A C T G C G T A A G T C A C T G A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TSCCSCGTGAYGK
--TCACGTGACC-
 A C G T A T G C G T A C A G T C A T C G A G T C A C T G A C G T A C T G C G T A A G T C A C T G A C G T
A C G T A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T

TFEB/MA0692.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TSCCSCGTGAYGK
-ATCACGTGAC--
 A C G T A T G C G T A C A G T C A T C G A G T C A C T G A C G T A C T G C G T A A G T C A C T G A C G T
A C G T T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T