Information for 5-GTAAAGTGAGAGG (Motif 10)

A C T G A C G T C G T A C G T A C G T A A C T G A C G T C T A G C T G A A C T G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C A G C T A G T C C G T A G T A C A C G T A C G T A C G T C G T A A G T C
p-value:1e-8
log p-value:-2.049e+01
Information Content per bp:1.940
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.8 +/- 27.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTAAAGTGAGAGG--
AGAAAGTGAAAGTGA
 A C T G A C G T C G T A C G T A C G T A A C T G A C G T C T A G C T G A A C T G C G T A A C T G A C T G A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTAAAGTGAGAGG
-GAAAGTGAAAGT
 A C T G A C G T C G T A C G T A C G T A A C T G A C G T C T A G C T G A A C T G C G T A A C T G A C T G
A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTAAAGTGAGAGG
GWAAYHTGABMC-
 A C T G A C G T C G T A C G T A C G T A A C T G A C G T C T A G C T G A A C T G C G T A A C T G A C T G
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T

IRF2/MA0051.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTAAAGTGAGAGG-----
GGAAAGCGAAACCAAAAC
 A C T G A C G T C G T A C G T A C G T A A C T G A C G T C T A G C T G A A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTAAAGTGAGAGG
-GAAAGTGAAAGT
 A C T G A C G T C G T A C G T A C G T A A C T G A C G T C T A G C T G A A C T G C G T A A C T G A C T G
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTAAAGTGAGAGG
GWAAYHTGAKMC-
 A C T G A C G T C G T A C G T A C G T A A C T G A C G T C T A G C T G A A C T G C G T A A C T G A C T G
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTAAAGTGAGAGG
-GAAASYGAAASY
 A C T G A C G T C G T A C G T A C G T A A C T G A C G T C T A G C T G A A C T G C G T A A C T G A C T G
A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GTAAAGTGAGAGG-----
--NNATTGACAGGTGCTT
 A C T G A C G T C G T A C G T A C G T A A C T G A C G T C T A G C T G A A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

IRF1/MA0050.2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GTAAAGTGAGAGG----
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C G T C T A G C T G A A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTAAAGTGAGAGG
-GRAASTGAAAST
 A C T G A C G T C G T A C G T A C G T A A C T G A C G T C T A G C T G A A C T G C G T A A C T G A C T G
A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T