p-value: | 1e-5 |
log p-value: | -1.270e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.46% |
Number of Background Sequences with motif | 3.0 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 71.3 +/- 9.4bp |
Average Position of motif in Background | 38.0 +/- 37.9bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ACATAGTCAC-- GHWACAWTGTWDCWA |
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DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer
Match Rank: | 2 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ACATAGTCAC-- GHTACAWTGTADCHR |
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PB0159.1_Rfx4_2/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ACATAGTCAC--- TACCCTAGTTACCGA |
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Pax2/MA0067.1/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | ACATAGTCAC-- ----AGTCACGC |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ACATAGTCAC--- CCGCATAGCAACGGA |
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Sox17/MA0078.1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ACATAGTCAC CTCATTGTC-- |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ACATAGTCAC-- SCCTAGCAACAG |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ACATAGTCAC--- TACCATAGCAACGGT |
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HMBOX1/MA0895.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ACATAGTCAC- -ACTAGTTAAC |
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PB0158.1_Rfx3_2/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------ACATAGTCAC------- ACTGACCCTTGGTTACCACAAAG |
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