Information for 1-TYTTBTCARACAC (Motif 1)

A C G T A G C T A C G T A C G T A G T C A C G T G T A C C G T A C T A G C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G C G A T T C A G C G A T A G T C A C G T A C T G G T C A T C A G T G C A C G T A C T G A G T C A
p-value:1e-11
log p-value:-2.720e+01
Information Content per bp:1.748
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif56.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets57.6 +/- 23.2bp
Average Position of motif in Background55.9 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TYTTBTCARACAC-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A G C T A C G T A C G T A G T C A C G T G T A C C G T A C T A G C G T A A G T C C G T A A G T C A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TYTTBTCARACAC--
-----CCAGACRSVB
 A C G T A G C T A C G T A C G T A G T C A C G T G T A C C G T A C T A G C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TYTTBTCARACAC
-----BCAGACWA
 A C G T A G C T A C G T A C G T A G T C A C G T G T A C C G T A C T A G C G T A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TYTTBTCARACAC
-----CCAGACAG
 A C G T A G C T A C G T A C G T A G T C A C G T G T A C C G T A C T A G C G T A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

POL007.1_BREd/Jaspar

Match Rank:5
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TYTTBTCARACAC
------NANANAC
 A C G T A G C T A C G T A C G T A G T C A C G T G T A C C G T A C T A G C G T A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TYTTBTCARACAC
ANATTTTTGCAANTN-
 A C G T A C G T A C G T A C G T A G C T A C G T A C G T A G T C A C G T G T A C C G T A C T A G C G T A A G T C C G T A A G T C
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TYTTBTCARACAC----
-AGCGGCACACACGCAA
 A C G T A G C T A C G T A C G T A G T C A C G T G T A C C G T A C T A G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TYTTBTCARACAC---
-ATTTGCATACAATGG
 A C G T A G C T A C G T A C G T A G T C A C G T G T A C C G T A C T A G C G T A A G T C C G T A A G T C A C G T A C G T A C G T
A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TYTTBTCARACAC
-SCTGTCAVTCAV
 A C G T A G C T A C G T A C G T A G T C A C G T G T A C C G T A C T A G C G T A A G T C C G T A A G T C
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

FOXP3/MA0850.1/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TYTTBTCARACAC
-----GTAAACA-
 A C G T A G C T A C G T A C G T A G T C A C G T G T A C C G T A C T A G C G T A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T