Homer de novo Motif Results (hs_HepatocellularCarcinoma_HepG2_cancer_USF1_SRX100572_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 769
Total background sequences = 12575
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G T C T A C G A T G C T G A C T C G A T A C G C T A G C T A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A 1e-216-4.974e+0234.46%2.51%13.6bp (32.1bp)USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer(0.971)
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motif file (matrix)
2 A T G C C T G A A T C G A G T C C A T G G T A C A G T C G T A C A G T C T A G C C G A T C T A G A T C G G A C T A C T G A C T G 1e-57-1.328e+027.80%0.36%21.3bp (27.0bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.955)
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motif file (matrix)
3 A C G T A T C G A G T C C G T A C G T A A T G C C G A T A C T G C G A T C G T A 1e-13-3.188e+011.17%0.02%33.5bp (16.2bp)PB0051.1_Osr2_1/Jaspar(0.709)
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motif file (matrix)
4 C G A T A C G T A C T G G T A C C T G A A G T C G T C A C T G A T G A C G T C A 1e-12-2.853e+015.07%1.25%27.3bp (31.7bp)CEBPA/MA0102.3/Jaspar(0.724)
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motif file (matrix)
5 A G T C G A T C G T C A A T G C C G T A A C T G A C T G C G T A C A G T G T C A A C G T A C T G G A C T 1e-12-2.828e+011.17%0.03%24.2bp (15.6bp)EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer(0.698)
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motif file (matrix)
6 A C T G C G A T A C T G A G T C C T A G G T A C C T A G A G T C C T G A C G A T A C T G C G A T A C T G 1e-12-2.817e+010.91%0.01%26.6bp (0.3bp)NRF(NRF)/Promoter/Homer(0.656)
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motif file (matrix)
7 A C T G T C G A C T G A G T C A A C T G A T C G C T A G C T G A C T A G C G T A A C T G C T A G G T C A C T G A A C T G C G T A 1e-12-2.817e+010.91%0.01%17.7bp (7.3bp)PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.607)
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motif file (matrix)
8 * A G C T C G T A C G T A C T G A A G T C C G T A A G T C C G T A A C T G A G C T A C T G A C G T C G T A 1e-11-2.756e+011.04%0.02%19.2bp (8.9bp)FOXP1/MA0481.1/Jaspar(0.713)
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motif file (matrix)
9 * G T C A C T G A A G C T C T G A T C G A T C G A A C G T G T A C A C G T A T C G 1e-11-2.730e+011.43%0.06%23.6bp (25.5bp)Hoxc9/MA0485.1/Jaspar(0.718)
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motif file (matrix)
10 * C G T A C G T A C G A T C T A G T A C G G T C A C G A T G C T A G C A T C T G A A C G T A G C T A C G T 1e-11-2.685e+012.34%0.25%29.4bp (24.2bp)Sox11/MA0869.1/Jaspar(0.610)
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motif file (matrix)
11 * A C G T A T C G A G C T A G T C A G T C T C G A A C G T C T A G A C T G A C T G A T C G A T G C A G C T 1e-11-2.553e+011.30%0.05%28.1bp (22.9bp)REST/MA0138.2/Jaspar(0.726)
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motif file (matrix)
12 * C G T A G T A C A C G T A C T G C T A G G T A C A G T C G C A T A G T C C G T A A C T G A T G C A G T C 1e-10-2.354e+011.43%0.08%15.9bp (25.4bp)AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer(0.662)
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motif file (matrix)
13 * A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A G C T A C T G A C T G C G T A A C T G 1e-10-2.342e+010.78%0.01%15.1bp (0.0bp)PB0134.1_Hnf4a_2/Jaspar(0.790)
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motif file (matrix)
14 * G T A C A C G T A C G T A G T C A G T C A G T C C A G T A G T C A C G T C G T A C G T A A C T G A C T G 1e-10-2.342e+010.78%0.00%32.6bp (0.0bp)CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer(0.641)
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motif file (matrix)
15 * A G T C C G A T A T G C A G T C G A T C A C G T A T C G A C G T A T G C A C G T A C T G A T G C T G A C G T C A G C T A A C G T 1e-10-2.342e+010.78%0.00%26.1bp (0.0bp)NFIA/MA0670.1/Jaspar(0.601)
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motif file (matrix)
16 * G T A C G T A C A C G T A G T C C G A T A T C G A T G C A C G T A C G T A T G C A G T C A C G T A C T G 1e-9-2.276e+011.30%0.07%24.9bp (36.8bp)ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer(0.746)
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motif file (matrix)
17 * T G C A A C G T C A G T C A T G T C A G A G C T G A T C C G T A T C G A T G C A 1e-9-2.185e+017.15%2.76%26.2bp (31.2bp)POL004.1_CCAAT-box/Jaspar(0.698)
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motif file (matrix)
18 * C G T A A C T G A C G T A G T C G A C T A T C G A G T C C G A T A T G C A G T C G T A C A G C T A C T G 1e-8-2.059e+010.91%0.03%16.8bp (32.5bp)Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer(0.575)
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motif file (matrix)
19 * A C T G A T G C A G T C A G T C A C T G A G T C A G T C C T A G A C T G A G T C A G T C G T C A C T A G 1e-8-1.931e+010.78%0.02%26.4bp (11.5bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.610)
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motif file (matrix)
20 * A G T C A G T C C T G A A G T C A G T C C G T A A G T C A C G T A C G T A C T G 1e-8-1.883e+010.65%0.01%4.7bp (11.5bp)NKX2-3/MA0672.1/Jaspar(0.785)
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motif file (matrix)
21 * C G T A A C T G A G T C A C G T A G T C A G T C A C T G A G T C G T C A A C G T A G T C A G T C C G T A 1e-8-1.883e+010.65%0.00%24.3bp (0.0bp)Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer(0.646)
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motif file (matrix)
22 * A G T C A G T C A C G T A G T C A T G C A G T C C G T A A C G T A C T G C G T A 1e-7-1.782e+011.17%0.09%33.8bp (25.6bp)Pax2/MA0067.1/Jaspar(0.625)
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motif file (matrix)
23 * A C T G T G C A C A G T A G T C A G T C A G C T C G T A A C T G A C T G C G T A 1e-7-1.712e+010.91%0.05%24.6bp (21.6bp)PB0181.1_Spdef_2/Jaspar(0.674)
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motif file (matrix)
24 * A G T C C G A T A T C G A G T C C G A T A T C G T C A G A T G C A T G C A T C G T C A G C T A G A G T C C T A G A C T G A T C G 1e-7-1.693e+010.78%0.03%16.7bp (17.6bp)SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer(0.601)
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motif file (matrix)
25 * A G T C A C G T A G T C G T A C C G T A A C T G C G T A A C T G A C G T A C G T 1e-6-1.541e+010.65%0.02%21.8bp (13.7bp)Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer(0.573)
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motif file (matrix)
26 * A G T C C G T A A G T C C G T A A C T G C G T A A C T G A G T C C G T A A C G T A C T G A C G T A G T C 1e-6-1.541e+010.65%0.02%23.0bp (20.5bp)PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer(0.634)
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motif file (matrix)
27 * A C T G A C T G C G T A A G T C C G T A C G T A A C T G A C T G A G T C A C G T 1e-6-1.442e+010.52%0.02%20.5bp (9.5bp)PB0200.1_Zfp187_2/Jaspar(0.758)
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motif file (matrix)
28 * A C T G A T G C A T C G A G T C G T A C A G T C A C T G A C T G A C T G T A G C A C T G A G T C G A T C 1e-6-1.442e+010.52%0.01%26.5bp (18.9bp)PB0052.1_Plagl1_1/Jaspar(0.612)
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motif file (matrix)
29 * C G T A G T A C A G T C C G T A A C T G A C G T A C T G A G T C A G T C A C G T A G T C A C G T A C T G 1e-5-1.169e+010.52%0.02%30.3bp (3.6bp)PB0099.1_Zfp691_1/Jaspar(0.620)
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motif file (matrix)