Information for 8-AATAAATCTG (Motif 9)

G T C A C T G A A G C T C T G A T C G A T C G A A C G T G T A C A C G T A T C G
Reverse Opposite:
A T G C C G T A A C T G G T C A A C G T A C G T A G C T C T G A A G C T A C G T
p-value:1e-11
log p-value:-2.730e+01
Information Content per bp:1.837
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets41.8 +/- 23.6bp
Average Position of motif in Background51.0 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9/MA0485.1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AATAAATCTG
GGCCATAAATCAC
 A C G T A C G T A C G T G T C A C T G A A G C T C T G A T C G A T C G A A C G T G T A C A C G T A T C G
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AATAAATCTG
GGCCATAAATCA-
 A C G T A C G T A C G T G T C A C T G A A G C T C T G A T C G A T C G A A C G T G T A C A C G T A T C G
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AATAAATCTG
GCCATAAATCA-
 A C G T A C G T G T C A C T G A A G C T C T G A T C G A T C G A A C G T G T A C A C G T A T C G
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AATAAATCTG
GGCCATAAATCA-
 A C G T A C G T A C G T G T C A C T G A A G C T C T G A T C G A T C G A A C G T G T A C A C G T A T C G
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AATAAATCTG
GCAATAAAA---
 A C G T A C G T G T C A C T G A A G C T C T G A T C G A T C G A A C G T G T A C A C G T A T C G
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:6
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------AATAAATCTG
ATGGTTCAATAATTTTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A A G C T C T G A T C G A T C G A A C G T G T A C A C G T A T C G
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AATAAATCTG
NGYCATAAAWCH-
 A C G T A C G T A C G T G T C A C T G A A G C T C T G A T C G A T C G A A C G T G T A C A C G T A T C G
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATAAATCTG
CCAATAAAAA--
 A C G T A C G T G T C A C T G A A G C T C T G A T C G A T C G A A C G T G T A C A C G T A T C G
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:9
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------AATAAATCTG
AAAGGTAATAAAATTT
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A A G C T C T G A T C G A T C G A A C G T G T A C A C G T A T C G
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AATAAATCTG
CCAATAAAAC--
 A C G T A C G T G T C A C T G A A G C T C T G A T C G A T C G A A C G T G T A C A C G T A T C G
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T