Information for 15-TGGACTTTTGGAG (Motif 13)

A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A G C T A C T G A C T G C G T A A C T G
Reverse Opposite:
A G T C C G A T A G T C G T A C C T G A C G T A G T C A C G T A A C T G A C G T A G T C G T A C C G T A
p-value:1e-10
log p-value:-2.342e+01
Information Content per bp:1.918
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 15.1bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----TGGACTTTTGGAG
NNATTGGACTTTNGNN-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A G C T A C T G A C T G C G T A A C T G
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTTGGAG
TTGACTTTT----
 A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A G C T A C T G A C T G C G T A A C T G
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGGACTTTTGGAG
CCTTGCAATTTTTNN-
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A G C T A C T G A C T G C G T A A C T G
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TGGACTTTTGGAG
NNNGTGACCTTTGNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A G C T A C T G A C T G C G T A A C T G
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGGACTTTTGGAG
NCTGGAATGC-----
 A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A G C T A C T G A C T G C G T A A C T G
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTTGGAG---
TGGACTTTGNNCTNTG
 A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A G C T A C T G A C T G C G T A A C T G A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Rarg/MA0859.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTTGGAG---
TTGACCTTTTGACCTT
 A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A G C T A C T G A C T G C G T A A C T G A C G T A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

RARA/MA0729.1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGGACTTTTGGAG---
CATTGACCTTTTGACCTC
 A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A G C T A C T G A C T G C G T A A C T G A C G T A C G T A C G T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTTGGAG--
TGGACTTTGNNCTCN
 A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A G C T A C T G A C T G C G T A A C T G A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TGGACTTTTGGAG
NNNNTGACCTTTNNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A G C T A C T G A C T G C G T A A C T G
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T