Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-191 | -4.417e+02 | 0.0000 | 268.0 | 34.85% | 408.6 | 3.25% | motif file (matrix) |
svg |
2 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-189 | -4.373e+02 | 0.0000 | 225.0 | 29.26% | 243.8 | 1.94% | motif file (matrix) |
svg |
3 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-177 | -4.091e+02 | 0.0000 | 274.0 | 35.63% | 495.9 | 3.94% | motif file (matrix) |
svg |
4 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-152 | -3.504e+02 | 0.0000 | 382.0 | 49.67% | 1419.9 | 11.28% | motif file (matrix) |
svg |
5 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-129 | -2.990e+02 | 0.0000 | 254.0 | 33.03% | 640.8 | 5.09% | motif file (matrix) |
svg |
6 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-124 | -2.872e+02 | 0.0000 | 278.0 | 36.15% | 838.3 | 6.66% | motif file (matrix) |
svg |
7 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-118 | -2.722e+02 | 0.0000 | 207.0 | 26.92% | 435.0 | 3.46% | motif file (matrix) |
svg |
8 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-108 | -2.489e+02 | 0.0000 | 215.0 | 27.96% | 540.9 | 4.30% | motif file (matrix) |
svg |
9 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-105 | -2.421e+02 | 0.0000 | 308.0 | 40.05% | 1265.5 | 10.05% | motif file (matrix) |
svg |
10 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-103 | -2.390e+02 | 0.0000 | 166.0 | 21.59% | 296.9 | 2.36% | motif file (matrix) |
svg |
11 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-103 | -2.389e+02 | 0.0000 | 223.0 | 29.00% | 622.0 | 4.94% | motif file (matrix) |
svg |
12 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-87 | -2.011e+02 | 0.0000 | 93.0 | 12.09% | 74.9 | 0.60% | motif file (matrix) |
svg |
13 |
| E-box(bHLH)/Promoter/Homer | 1e-59 | -1.373e+02 | 0.0000 | 74.0 | 9.62% | 81.6 | 0.65% | motif file (matrix) |
svg |
14 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-59 | -1.359e+02 | 0.0000 | 71.0 | 9.23% | 73.4 | 0.58% | motif file (matrix) |
svg |
15 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-47 | -1.094e+02 | 0.0000 | 128.0 | 16.64% | 438.1 | 3.48% | motif file (matrix) |
svg |
16 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-41 | -9.528e+01 | 0.0000 | 70.0 | 9.10% | 131.4 | 1.04% | motif file (matrix) |
svg |
17 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-15 | -3.513e+01 | 0.0000 | 130.0 | 16.91% | 1004.5 | 7.98% | motif file (matrix) |
svg |
18 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-11 | -2.672e+01 | 0.0000 | 131.0 | 17.04% | 1141.7 | 9.07% | motif file (matrix) |
svg |
19 |
| CRE(bZIP)/Promoter/Homer | 1e-11 | -2.672e+01 | 0.0000 | 47.0 | 6.11% | 232.2 | 1.85% | motif file (matrix) |
svg |
20 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-11 | -2.607e+01 | 0.0000 | 55.0 | 7.15% | 309.0 | 2.46% | motif file (matrix) |
svg |
21 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-11 | -2.585e+01 | 0.0000 | 66.0 | 8.58% | 418.5 | 3.33% | motif file (matrix) |
svg |
22 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-11 | -2.566e+01 | 0.0000 | 58.0 | 7.54% | 341.0 | 2.71% | motif file (matrix) |
svg |
23 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-10 | -2.378e+01 | 0.0000 | 154.0 | 20.03% | 1486.5 | 11.81% | motif file (matrix) |
svg |
24 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-9 | -2.287e+01 | 0.0000 | 58.0 | 7.54% | 367.6 | 2.92% | motif file (matrix) |
svg |
25 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-9 | -2.262e+01 | 0.0000 | 68.0 | 8.84% | 473.3 | 3.76% | motif file (matrix) |
svg |
26 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-9 | -2.225e+01 | 0.0000 | 44.0 | 5.72% | 238.5 | 1.89% | motif file (matrix) |
svg |
27 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-9 | -2.159e+01 | 0.0000 | 224.0 | 29.13% | 2493.5 | 19.81% | motif file (matrix) |
svg |
28 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-7 | -1.829e+01 | 0.0000 | 55.0 | 7.15% | 385.6 | 3.06% | motif file (matrix) |
svg |
29 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-7 | -1.810e+01 | 0.0000 | 44.0 | 5.72% | 274.8 | 2.18% | motif file (matrix) |
svg |
30 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-7 | -1.788e+01 | 0.0000 | 27.0 | 3.51% | 121.8 | 0.97% | motif file (matrix) |
svg |
31 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-6 | -1.508e+01 | 0.0000 | 164.0 | 21.33% | 1832.3 | 14.56% | motif file (matrix) |
svg |
32 |
| ETS(ETS)/Promoter/Homer | 1e-6 | -1.484e+01 | 0.0000 | 33.0 | 4.29% | 197.6 | 1.57% | motif file (matrix) |
svg |
33 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-6 | -1.426e+01 | 0.0000 | 47.0 | 6.11% | 348.2 | 2.77% | motif file (matrix) |
svg |
34 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-6 | -1.397e+01 | 0.0000 | 6.0 | 0.78% | 5.5 | 0.04% | motif file (matrix) |
svg |
35 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-6 | -1.396e+01 | 0.0000 | 77.0 | 10.01% | 704.3 | 5.60% | motif file (matrix) |
svg |
36 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.372e+01 | 0.0000 | 80.0 | 10.40% | 746.0 | 5.93% | motif file (matrix) |
svg |
37 |
| HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer | 1e-5 | -1.368e+01 | 0.0000 | 33.0 | 4.29% | 208.5 | 1.66% | motif file (matrix) |
svg |
38 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-5 | -1.357e+01 | 0.0000 | 25.0 | 3.25% | 133.0 | 1.06% | motif file (matrix) |
svg |
39 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-5 | -1.283e+01 | 0.0000 | 64.0 | 8.32% | 566.7 | 4.50% | motif file (matrix) |
svg |
40 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-5 | -1.276e+01 | 0.0000 | 231.0 | 30.04% | 2881.2 | 22.89% | motif file (matrix) |
svg |
41 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-5 | -1.264e+01 | 0.0000 | 8.0 | 1.04% | 14.7 | 0.12% | motif file (matrix) |
svg |
42 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-5 | -1.257e+01 | 0.0000 | 35.0 | 4.55% | 240.1 | 1.91% | motif file (matrix) |
svg |
43 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-5 | -1.231e+01 | 0.0000 | 45.0 | 5.85% | 352.1 | 2.80% | motif file (matrix) |
svg |
44 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-5 | -1.229e+01 | 0.0000 | 10.0 | 1.30% | 25.3 | 0.20% | motif file (matrix) |
svg |
45 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-5 | -1.188e+01 | 0.0001 | 35.0 | 4.55% | 248.3 | 1.97% | motif file (matrix) |
svg |
46 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-5 | -1.176e+01 | 0.0001 | 61.0 | 7.93% | 549.7 | 4.37% | motif file (matrix) |
svg |
47 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-5 | -1.174e+01 | 0.0001 | 34.0 | 4.42% | 239.4 | 1.90% | motif file (matrix) |
svg |
48 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-4 | -1.125e+01 | 0.0001 | 67.0 | 8.71% | 633.4 | 5.03% | motif file (matrix) |
svg |
49 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-4 | -1.122e+01 | 0.0001 | 71.0 | 9.23% | 685.0 | 5.44% | motif file (matrix) |
svg |
50 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-4 | -1.099e+01 | 0.0001 | 28.0 | 3.64% | 185.8 | 1.48% | motif file (matrix) |
svg |
51 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-4 | -1.098e+01 | 0.0001 | 84.0 | 10.92% | 857.5 | 6.81% | motif file (matrix) |
svg |
52 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-4 | -1.047e+01 | 0.0002 | 44.0 | 5.72% | 368.4 | 2.93% | motif file (matrix) |
svg |
53 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-4 | -1.029e+01 | 0.0002 | 62.0 | 8.06% | 590.3 | 4.69% | motif file (matrix) |
svg |
54 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.868e+00 | 0.0003 | 23.0 | 2.99% | 146.6 | 1.16% | motif file (matrix) |
svg |
55 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-4 | -9.837e+00 | 0.0004 | 37.0 | 4.81% | 297.6 | 2.36% | motif file (matrix) |
svg |
56 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.396e+00 | 0.0005 | 45.0 | 5.85% | 398.0 | 3.16% | motif file (matrix) |
svg |
57 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-4 | -9.362e+00 | 0.0005 | 17.0 | 2.21% | 93.1 | 0.74% | motif file (matrix) |
svg |
58 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-4 | -9.333e+00 | 0.0006 | 33.0 | 4.29% | 259.7 | 2.06% | motif file (matrix) |
svg |
59 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-3 | -8.833e+00 | 0.0009 | 7.0 | 0.91% | 18.7 | 0.15% | motif file (matrix) |
svg |
60 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.659e+00 | 0.0011 | 41.0 | 5.33% | 363.9 | 2.89% | motif file (matrix) |
svg |
61 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-3 | -8.497e+00 | 0.0012 | 90.0 | 11.70% | 1005.4 | 7.99% | motif file (matrix) |
svg |
62 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -8.414e+00 | 0.0013 | 44.0 | 5.72% | 404.3 | 3.21% | motif file (matrix) |
svg |
63 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-3 | -8.345e+00 | 0.0014 | 16.0 | 2.08% | 92.6 | 0.74% | motif file (matrix) |
svg |
64 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-3 | -8.093e+00 | 0.0017 | 37.0 | 4.81% | 325.4 | 2.59% | motif file (matrix) |
svg |
65 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-3 | -8.089e+00 | 0.0017 | 43.0 | 5.59% | 398.3 | 3.16% | motif file (matrix) |
svg |
66 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-3 | -7.917e+00 | 0.0020 | 86.0 | 11.18% | 968.2 | 7.69% | motif file (matrix) |
svg |
67 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.563e+00 | 0.0028 | 58.0 | 7.54% | 602.0 | 4.78% | motif file (matrix) |
svg |
68 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-3 | -7.279e+00 | 0.0037 | 29.0 | 3.77% | 244.1 | 1.94% | motif file (matrix) |
svg |
69 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-3 | -7.227e+00 | 0.0038 | 12.0 | 1.56% | 64.0 | 0.51% | motif file (matrix) |
svg |
70 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-3 | -7.151e+00 | 0.0041 | 15.0 | 1.95% | 93.5 | 0.74% | motif file (matrix) |
svg |
71 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.131e+00 | 0.0041 | 7.0 | 0.91% | 24.3 | 0.19% | motif file (matrix) |
svg |
72 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-3 | -7.075e+00 | 0.0043 | 31.0 | 4.03% | 271.4 | 2.16% | motif file (matrix) |
svg |
73 |
| GFY(?)/Promoter/Homer | 1e-2 | -6.854e+00 | 0.0053 | 10.0 | 1.30% | 49.3 | 0.39% | motif file (matrix) |
svg |
74 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-2 | -6.795e+00 | 0.0055 | 32.0 | 4.16% | 288.7 | 2.29% | motif file (matrix) |
svg |
75 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-2 | -6.736e+00 | 0.0058 | 29.0 | 3.77% | 253.8 | 2.02% | motif file (matrix) |
svg |
76 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -6.187e+00 | 0.0098 | 35.0 | 4.55% | 337.7 | 2.68% | motif file (matrix) |
svg |
77 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -6.120e+00 | 0.0104 | 29.0 | 3.77% | 264.2 | 2.10% | motif file (matrix) |
svg |
78 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -6.109e+00 | 0.0104 | 37.0 | 4.81% | 364.8 | 2.90% | motif file (matrix) |
svg |
79 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -5.945e+00 | 0.0121 | 31.0 | 4.03% | 292.6 | 2.32% | motif file (matrix) |
svg |
80 |
| HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.879e+00 | 0.0127 | 7.0 | 0.91% | 30.4 | 0.24% | motif file (matrix) |
svg |
81 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -5.789e+00 | 0.0138 | 181.0 | 23.54% | 2451.3 | 19.48% | motif file (matrix) |
svg |
82 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-2 | -5.566e+00 | 0.0170 | 27.0 | 3.51% | 250.6 | 1.99% | motif file (matrix) |
svg |
83 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.518e+00 | 0.0176 | 103.0 | 13.39% | 1299.7 | 10.33% | motif file (matrix) |
svg |
84 |
| Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer | 1e-2 | -5.257e+00 | 0.0226 | 16.0 | 2.08% | 125.7 | 1.00% | motif file (matrix) |
svg |
85 |
| Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer | 1e-2 | -5.153e+00 | 0.0248 | 6.0 | 0.78% | 26.7 | 0.21% | motif file (matrix) |
svg |
86 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -4.906e+00 | 0.0313 | 19.0 | 2.47% | 165.7 | 1.32% | motif file (matrix) |
svg |
87 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -4.850e+00 | 0.0327 | 34.0 | 4.42% | 355.6 | 2.83% | motif file (matrix) |
svg |
88 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -4.764e+00 | 0.0353 | 30.0 | 3.90% | 305.7 | 2.43% | motif file (matrix) |
svg |
89 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.727e+00 | 0.0362 | 66.0 | 8.58% | 799.4 | 6.35% | motif file (matrix) |
svg |
90 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-2 | -4.702e+00 | 0.0367 | 269.0 | 34.98% | 3894.1 | 30.94% | motif file (matrix) |
svg |
91 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -4.687e+00 | 0.0368 | 28.0 | 3.64% | 281.3 | 2.23% | motif file (matrix) |
svg |
92 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-2 | -4.660e+00 | 0.0375 | 3.0 | 0.39% | 7.7 | 0.06% | motif file (matrix) |
svg |