Information for 11-TSTCCATRGGGCT (Motif 11)

A C G T A T C G A G C T A G T C A G T C T C G A A C G T C T A G A C T G A C T G A T C G A T G C A G C T
Reverse Opposite:
C T G A A T C G A T G C G T A C A G T C A G T C T G C A A G C T A C T G A C T G T C G A A T G C C G T A
p-value:1e-11
log p-value:-2.553e+01
Information Content per bp:1.768
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets48.1 +/- 28.1bp
Average Position of motif in Background40.3 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----TSTCCATRGGGCT---
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G C T A G T C A G T C T C G A A C G T C T A G A C T G A C T G A T C G A T G C A G C T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TSTCCATRGGGCT
TGCCCTGAGGGCA
 A C G T A T C G A G C T A G T C A G T C T C G A A C G T C T A G A C T G A C T G A T C G A T G C A G C T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TSTCCATRGGGCT
TGCCCTGAGGGCA
 A C G T A T C G A G C T A G T C A G T C T C G A A C G T C T A G A C T G A C T G A T C G A T G C A G C T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:4
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----TSTCCATRGGGCT--
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G C T A G T C A G T C T C G A A C G T C T A G A C T G A C T G A T C G A T G C A G C T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TSTCCATRGGGCT
TGCCCTGAGGGCA
 A C G T A T C G A G C T A G T C A G T C T C G A A C G T C T A G A C T G A C T G A T C G A T G C A G C T
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TSTCCATRGGGCT
NGTCCCNNGGGA-
 A C G T A T C G A G C T A G T C A G T C T C G A A C G T C T A G A C T G A C T G A T C G A T G C A G C T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TSTCCATRGGGCT-
TTGCCCTAGGGCAT
 A C G T A T C G A G C T A G T C A G T C T C G A A C G T C T A G A C T G A C T G A T C G A T G C A G C T A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TSTCCATRGGGCT
WTGSCCTSAGGS--
 A C G T A C G T A T C G A G C T A G T C A G T C T C G A A C G T C T A G A C T G A C T G A T C G A T G C A G C T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TSTCCATRGGGCT
ATGCCCTGAGGC--
 A C G T A C G T A T C G A G C T A G T C A G T C T C G A A C G T C T A G A C T G A C T G A T C G A T G C A G C T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TSTCCATRGGGCT-
TCACCTCTGGGCAG
 A C G T A T C G A G C T A G T C A G T C T C G A A C G T C T A G A C T G A C T G A T C G A T G C A G C T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G