Information for 19-GCCCGCCGGCCAG (Motif 19)

A C T G A T G C A G T C A G T C A C T G A G T C A G T C C T A G A C T G A G T C A G T C G T C A C T A G
Reverse Opposite:
A G T C A C G T A C T G A C T G A G T C A G T C C T A G A C T G G T A C A C T G C T A G A T C G G T A C
p-value:1e-8
log p-value:-1.931e+01
Information Content per bp:1.795
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.8 +/- 26.4bp
Average Position of motif in Background78.8 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCCGCCGGCCAG
TGGCAGNCTGCCAG
A C G T A C T G A T G C A G T C A G T C A C T G A G T C A G T C C T A G A C T G A G T C A G T C G T C A C T A G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:GCCCGCCGGCCAG
-------TGCCAA
A C T G A T G C A G T C A G T C A C T G A G T C A G T C C T A G A C T G A G T C A G T C G T C A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCCCGCCGGCCAG
-GCCTCAGGGCAT
A C T G A T G C A G T C A G T C A C T G A G T C A G T C C T A G A C T G A G T C A G T C G T C A C T A G
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCCCGCCGGCCAG
-SCCTSAGGSCAW
A C T G A T G C A G T C A G T C A C T G A G T C A G T C C T A G A C T G A G T C A G T C G T C A C T A G
A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GCCCGCCGGCCAG-
-----CGTGCCAAG
A C T G A T G C A G T C A G T C A C T G A G T C A G T C C T A G A C T G A G T C A G T C G T C A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCCGCCGGCCAG
TGCCCNNAGGGCA-
A C G T A C T G A T G C A G T C A G T C A C T G A G T C A G T C C T A G A C T G A G T C A G T C G T C A C T A G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCCGCCGGCCAG
TGCCCTGAGGGCA-
A C G T A C T G A T G C A G T C A G T C A C T G A G T C A G T C C T A G A C T G A G T C A G T C G T C A C T A G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCCGCCGGCCAG
TGCCCCCGGGCA--
A C G T A C T G A T G C A G T C A G T C A C T G A G T C A G T C C T A G A C T G A G T C A G T C G T C A C T A G
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCCGCCGGCCAG
CGCCTCAGGCA--
A C T G A T G C A G T C A G T C A C T G A G T C A G T C C T A G A C T G A G T C A G T C G T C A C T A G
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCCGCCGGCCAG
TGCCCTGAGGGCA-
A C G T A C T G A T G C A G T C A G T C A C T G A G T C A G T C C T A G A C T G A G T C A G T C G T C A C T A G
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T