Homer de novo Motif Results (hs_HepatocellularCarcinoma_HepG2_cancer_JUND_SRX150728_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 708
Total background sequences = 45397
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T G A C A G T C T A G T C G A G A C T A C T G C G T A T A G C C G A T A G T C C G T A A G C T G A T C T G C A A C G T C A G T 1e-269-6.203e+0233.33%1.11%15.2bp (36.2bp)Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer(0.992)
More Information | Similar Motifs Found
motif file (matrix)
2 C T A G T C G A A C G T A C T G C G T A A G T C T C A G C G A T G T A C C G T A A G C T G A T C G T C A G T C A G C T A G C A T 1e-146-3.366e+0215.54%0.30%13.0bp (41.1bp)c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer(0.961)
More Information | Similar Motifs Found
motif file (matrix)
3 A C G T G C A T C G T A C A T G G A C T A C G T C T G A A C G T A C G T C A T G A G T C C G T A A C G T A G T C C G T A A C G T 1e-40-9.278e+012.40%0.01%16.7bp (0.4bp)ATF4/MA0833.1/Jaspar(0.878)
More Information | Similar Motifs Found
motif file (matrix)
4 C A T G T A G C A G T C G T A C A G T C G T A C C G A T C T A G A T C G C G A T C T A G C T A G G T A C 1e-27-6.297e+013.39%0.11%19.7bp (25.4bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.893)
More Information | Similar Motifs Found
motif file (matrix)
5 A C T G C G T A A G C T A C G T A G C T A C G T A T G C A T G C C G T A C T G A A C T G C G A T A C G T A C T G C G T A A C G T 1e-14-3.290e+010.99%0.01%21.5bp (6.5bp)NFATC2/MA0152.1/Jaspar(0.618)
More Information | Similar Motifs Found
motif file (matrix)
6 T C A G G C T A A C G T C A T G C G T A C A T G A C T G C G A T T G A C C G T A C T A G G T C A C T A G C G T A A C T G C A T G 1e-14-3.290e+010.99%0.01%14.8bp (10.0bp)JUND(var.2)/MA0492.1/Jaspar(0.663)
More Information | Similar Motifs Found
motif file (matrix)
7 T C A G G T C A T A G C T G A C A G C T A G C T A C G T A C T G A C T G C T G A G T A C A T G C C G A T 1e-12-2.795e+014.94%1.12%25.6bp (29.1bp)Rarg/MA0859.1/Jaspar(0.772)
More Information | Similar Motifs Found
motif file (matrix)
8 * C A G T A C T G A C T G C A G T A C T G C T A G T G C A G C T A A C G T A C T G A G T C C G T A A C T G T A C G C T A G C G A T 1e-11-2.747e+010.85%0.01%16.2bp (16.0bp)TEAD3/MA0808.1/Jaspar(0.566)
More Information | Similar Motifs Found
motif file (matrix)
9 * C G T A A T C G A T G C G C T A A G C T G T A C C G A T A G C T C A G T G C A T T G A C G A C T A T G C G T A C C G A T A C T G 1e-11-2.707e+013.11%0.43%23.5bp (25.6bp)PB0192.1_Tcfap2e_2/Jaspar(0.569)
More Information | Similar Motifs Found
motif file (matrix)
10 * A C G T A G C T A T G C C G T A C G T A C T A G A C T G A G T C A G T C C G T A C G T A A C T G C T A G 1e-11-2.565e+010.71%0.00%20.1bp (7.8bp)Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer(0.772)
More Information | Similar Motifs Found
motif file (matrix)
11 * C G A T A T G C A G C T C A G T A C T G A C T G C G T A C G T A G C T A A T G C T C G A A C G T A C T G 1e-9-2.262e+011.41%0.07%31.1bp (26.5bp)Stat5a::Stat5b/MA0519.1/Jaspar(0.750)
More Information | Similar Motifs Found
motif file (matrix)
12 * A G T C A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C G T C G T A C G T A T A C G C A G T 1e-9-2.220e+010.71%0.01%20.2bp (15.1bp)Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.679)
More Information | Similar Motifs Found
motif file (matrix)
13 * C G A T A G T C A T G C G T A C C T A G A T C G A C T G G C T A T C A G A G T C A G T C A G T C C G T A T A G C A T G C A T G C 1e-9-2.220e+010.71%0.01%29.8bp (14.2bp)Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer(0.610)
More Information | Similar Motifs Found
motif file (matrix)
14 * C T A G C G T A G T A C C G T A A C T G C G T A C G T A C G T A G C T A C T A G C G A T C T A G C G T A C G A T A C T G C G T A 1e-9-2.220e+010.71%0.00%16.0bp (8.6bp)Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer(0.583)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T A T G C A C G T C T G A G T C A A G T C A G T C C G T A A T G C A C G T C G T A A C T G T A C G 1e-9-2.201e+010.85%0.01%27.6bp (17.9bp)CTCF/MA0139.1/Jaspar(0.574)
More Information | Similar Motifs Found
motif file (matrix)
16 * G T C A A C G T G T A C G A T C A C G T A G T C A G T C C G T A A C T G C A T G A C T G G T A C T C G A C G T A A C T G C T G A 1e-9-2.110e+011.13%0.04%18.8bp (30.1bp)PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer(0.515)
More Information | Similar Motifs Found
motif file (matrix)
17 * A G C T C G A T A G T C C G A T A G C T T G C A A G T C C G A T G T A C C T G A A C G T C G T A G T C A A G C T C T A G G T A C 1e-9-2.093e+010.85%0.01%20.2bp (22.7bp)SPIC/MA0687.1/Jaspar(0.595)
More Information | Similar Motifs Found
motif file (matrix)
18 * C T A G A C T G C G T A A C T G A C T G A T G C C T A G A C T G A C T G A C G T 1e-8-2.023e+011.98%0.23%31.4bp (24.7bp)SP2/MA0516.1/Jaspar(0.820)
More Information | Similar Motifs Found
motif file (matrix)
19 * C G T A A G T C C G T A C G A T C G T A A C T G C G T A A C T G C G A T A G T C C G T A A G T C C G T A G T A C C G T A G T A C 1e-8-1.987e+010.56%0.00%22.6bp (16.0bp)PB0130.1_Gm397_2/Jaspar(0.590)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C T G C G T A A C T G A T C G A G C T A C G T A C G T A C T G A C G T A C T G C G T A C G T A C T G A C G A T A C G T C G T A 1e-8-1.987e+010.56%0.00%33.6bp (5.3bp)CEBPA/MA0102.3/Jaspar(0.584)
More Information | Similar Motifs Found
motif file (matrix)
21 * C T A G A G T C A C G T G T C A C G A T A C T G C T G A C G T A A G T C C G A T 1e-8-1.955e+011.13%0.05%15.0bp (32.8bp)Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer(0.643)
More Information | Similar Motifs Found
motif file (matrix)
22 * C G A T A C G T A C G T C T G A A C T G C G A T T C A G G T C A A G T C C G T A A G T C A G T C C G T A 1e-8-1.944e+010.99%0.03%24.3bp (38.0bp)PH0164.1_Six4/Jaspar(0.569)
More Information | Similar Motifs Found
motif file (matrix)
23 * C G T A T A G C A C G T A C T G A C G T A T C G A C G T C G A T C G T A A C G T A C T G A G T C C G T A 1e-8-1.876e+010.71%0.01%22.8bp (15.2bp)Pou5f1::Sox2/MA0142.1/Jaspar(0.680)
More Information | Similar Motifs Found
motif file (matrix)
24 * A G T C A C G T A T G C C G T A A C T G A C T G A G T C G C T A A C G T A G T C A G T C C T G A A T C G 1e-7-1.765e+010.71%0.01%19.4bp (15.6bp)TFAP2B(var.2)/MA0812.1/Jaspar(0.621)
More Information | Similar Motifs Found
motif file (matrix)
25 * A C T G A C G T A C T G A C G T G T C A C G T A A C T G C G T A C G T A A C G T A C G T C G T A A C G T 1e-7-1.711e+010.56%0.01%26.3bp (23.9bp)PB0172.1_Sox1_2/Jaspar(0.618)
More Information | Similar Motifs Found
motif file (matrix)
26 * C G T A A C T G A T C G A T G C A C G T C G T A C G T A C T G A A G T C C G T A 1e-7-1.693e+011.13%0.07%20.6bp (30.4bp)FOXF2/MA0030.1/Jaspar(0.776)
More Information | Similar Motifs Found
motif file (matrix)
27 * C T G A C A G T T C A G A C G T T G C A G C T A T G C A A G T C C G T A T C A G 1e-6-1.584e+014.38%1.47%28.0bp (30.6bp)FOXP2/MA0593.1/Jaspar(0.886)
More Information | Similar Motifs Found
motif file (matrix)
28 * A C T G T A C G G T C A T A G C G T A C G T C A G C T A C G T A C G A T C T A G C T G A G C T A C T G A T G A C C G T A C G T A 1e-6-1.520e+011.27%0.12%21.9bp (24.5bp)PB0148.1_Mtf1_2/Jaspar(0.613)
More Information | Similar Motifs Found
motif file (matrix)
29 * G C T A T G A C C G T A G C A T A C T G A C T G T G A C G T A C G A C T T C G A 1e-6-1.431e+010.42%0.00%18.5bp (14.2bp)PB0098.1_Zfp410_1/Jaspar(0.620)
More Information | Similar Motifs Found
motif file (matrix)
30 * A G C T A C T G A G T C A G T C A G T C C T G A G T A C A G T C C G A T A C T G A G C T A C T G A C T G C G T A C T G A A C T G 1e-6-1.431e+010.42%0.00%18.2bp (0.0bp)PB0089.1_Tcfe2a_1/Jaspar(0.636)
More Information | Similar Motifs Found
motif file (matrix)
31 * G T C A A G C T A G T C A C G T A C G T A C G T A C T G G T A C A C G T A T G C A C G T C G A T A C G T A C G T C G T A A C T G 1e-6-1.431e+010.42%0.00%16.7bp (0.0bp)Tcf7/MA0769.1/Jaspar(0.796)
More Information | Similar Motifs Found
motif file (matrix)