Information for 23-GTGTAAGAATTAT (Motif 25)

A C T G A C G T A C T G A C G T G T C A C G T A A C T G C G T A C G T A A C G T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A C G A T A C G T A G T C A C G T A C G T C G T A A G T C C G T A A G T C
p-value:1e-7
log p-value:-1.711e+01
Information Content per bp:1.951
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.8 +/- 26.3bp
Average Position of motif in Background73.7 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGTAAGAATTAT--
NNNTAACAATTATAN
 A C T G A C G T A C T G A C G T G T C A C G T A A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

MF0010.1_Homeobox_class/Jaspar

Match Rank:2
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:GTGTAAGAATTAT-
-------AATTATT
 A C T G A C G T A C T G A C G T G T C A C G T A A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T

PH0021.1_Dlx2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGTAAGAATTAT---
CTGANNTAATTATNNN
 A C T G A C G T A C T G A C G T G T C A C G T A A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
T A G C G A C T C A T G C T G A C T A G T A C G G A C T C G T A C G T A C G A T A C G T C T G A G A C T G A C T A G T C A G T C

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTGTAAGAATTAT------
--GGAAAAATTGTTAGGAA
 A C T G A C G T A C T G A C G T G T C A C G T A A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PH0020.1_Dlx1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTGTAAGAATTAT-
CTGAGGTAATTAAT
 A C T G A C G T A C T G A C G T G T C A C G T A A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A G T C A G C T C T A G T G C A C T A G C T A G G A C T T C G A C G T A C G A T A C G T C T G A C G T A A G C T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GTGTAAGAATTAT----
-----TGATTTATGGCC
 A C T G A C G T A C T G A C G T G T C A C G T A A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

Hoxc9/MA0485.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GTGTAAGAATTAT----
----NTGATTTATGGCC
 A C T G A C G T A C T G A C G T G T C A C G T A A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Dlx1/MA0879.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTGTAAGAATTAT-
----CCTAATTATC
 A C T G A C G T A C T G A C G T G T C A C G T A A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GTGTAAGAATTAT
----NGGGATTA-
 A C T G A C G T A C T G A C G T G T C A C G T A A C T G C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GTGTAAGAATTAT------
-----AAAATTGTTATGAA
 A C T G A C G T A C T G A C G T G T C A C G T A A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A