Information for 12-RASCTTTGGRCCT (Motif 7)

T C A G G T C A T A G C T G A C A G C T A G C T A C G T A C T G A C T G C T G A G T A C A T G C C G A T
Reverse Opposite:
C G T A A T C G C A T G G A C T G T A C G T A C C G T A C T G A C T G A A C T G A T C G A C G T A G T C
p-value:1e-12
log p-value:-2.795e+01
Information Content per bp:1.676
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.94%
Number of Background Sequences with motif510.8
Percentage of Background Sequences with motif1.12%
Average Position of motif in Targets44.6 +/- 25.6bp
Average Position of motif in Background50.9 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarg/MA0859.1/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--RASCTTTGGRCCT-
TTGACCTTTTGACCTT
 A C G T A C G T T C A G G T C A T A G C T G A C A G C T A G C T A C G T A C T G A C T G C T G A G T A C A T G C C G A T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-RASCTTTGGRCCT-
TGACCTTTTGACCTC
 A C G T T C A G G T C A T A G C T G A C A G C T A G C T A C G T A C T G A C T G C T G A G T A C A T G C C G A T A C G T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

Rarb/MA0857.1/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-RASCTTTGGRCCT--
TGACCTTTTGACCTTT
 A C G T T C A G G T C A T A G C T G A C A G C T A G C T A C G T A C T G A C T G C T G A G T A C A T G C C G A T A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

RARA/MA0729.1/Jaspar

Match Rank:4
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----RASCTTTGGRCCT-
CATTGACCTTTTGACCTC
 A C G T A C G T A C G T A C G T T C A G G T C A T A G C T G A C A G C T A G C T A C G T A C T G A C T G C T G A G T A C A T G C C G A T A C G T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-RASCTTTGGRCCT-
TGGACTTTGNNCTCN
 A C G T T C A G G T C A T A G C T G A C A G C T A G C T A C G T A C T G A C T G C T G A G T A C A T G C C G A T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-RASCTTTGGRCCT--
TGGACTTTGNNCTNTG
 A C G T T C A G G T C A T A G C T G A C A G C T A G C T A C G T A C T G A C T G C T G A G T A C A T G C C G A T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-RASCTTTGGRCCT
TGACCTTTGCCCCA
 A C G T T C A G G T C A T A G C T G A C A G C T A G C T A C G T A C T G A C T G C T G A G T A C A T G C C G A T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----RASCTTTGGRCCT
NNNGTGACCTTTGNNN--
 A C G T A C G T A C G T A C G T A C G T T C A G G T C A T A G C T G A C A G C T A G C T A C G T A C T G A C T G C T G A G T A C A T G C C G A T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----RASCTTTGGRCCT
NNNNTGACCTTTNNNN--
 A C G T A C G T A C G T A C G T A C G T T C A G G T C A T A G C T G A C A G C T A G C T A C G T A C T G A C T G C T G A G T A C A T G C C G A T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-RASCTTTGGRCCT-
TGACCTTTGCCCTAN
 A C G T T C A G G T C A T A G C T G A C A G C T A G C T A C G T A C T G A C T G C T G A G T A C A T G C C G A T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C