Information for 17-CTGCCTGGKAASK (Motif 12)

A G T C A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C G T C G T A C G T A T A C G C A G T
Reverse Opposite:
G T A C A T G C A C G T A C G T G T C A A G T C A G T C C G T A A C T G A C T G A G T C C G T A A C T G
p-value:1e-9
log p-value:-2.220e+01
Information Content per bp:1.895
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.8 +/- 20.2bp
Average Position of motif in Background39.3 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CTGCCTGGKAASK
---CSTGGGAAAD
 A G T C A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C G T C G T A C G T A T A C G C A G T
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTGCCTGGKAASK
-WDNCTGGGCA--
 A G T C A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C G T C G T A C G T A T A C G C A G T
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGCCTGGKAASK--
TTTCCTGGAAAGNNN
 A G T C A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C G T C G T A C G T A T A C G C A G T A C G T A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGCCTGGKAASK
CTGTCTGG-----
 A G T C A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C G T C G T A C G T A T A C G C A G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGCCTGGKAASK
CTTCCNGGAA---
 A G T C A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C G T C G T A C G T A T A C G C A G T
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGCCTGGKAASK
NCTTCCNGGAAGNN
 A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C G T C G T A C G T A T A C G C A G T
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGCCTGGKAASK
TTTCCNGGAAAN-
 A G T C A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C G T C G T A C G T A T A C G C A G T
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTGCCTGGKAASK-
--SCCTAGCAACAG
 A G T C A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C G T C G T A C G T A T A C G C A G T A C G T
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTGCCTGGKAASK
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C G T C G T A C G T A T A C G C A G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGCCTGGKAASK
CTTCTGGGAAA--
 A G T C A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C G T C G T A C G T A T A C G C A G T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T