Information for 13-GACAGAAAAGTGATGA (Motif 14)

C T A G C G T A G T A C C G T A A C T G C G T A C G T A C G T A G C T A C T A G C G A T C T A G C G T A C G A T A C T G C G T A
Reverse Opposite:
A C G T T A G C C G T A A C G T A G T C C G T A A G T C C A G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C
p-value:1e-9
log p-value:-2.220e+01
Information Content per bp:1.825
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.6 +/- 16.0bp
Average Position of motif in Background44.0 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GACAGAAAAGTGATGA
----GWAAYHTGABMC
 C T A G C G T A G T A C C G T A A C T G C G T A C G T A C G T A G C T A C T A G C G A T C T A G C G T A C G A T A C T G C G T A
A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GACAGAAAAGTGATGA
----GWAAYHTGAKMC
 C T A G C G T A G T A C C G T A A C T G C G T A C G T A C G T A G C T A C T A G C G A T C T A G C G T A C G A T A C T G C G T A
A C G T A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

PB0021.1_Gata3_1/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GACAGAAAAGTGATGA--
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T C T A G C G T A G T A C C G T A A C T G C G T A C G T A C G T A G C T A C T A G C G A T C T A G C G T A C G A T A C T G C G T A A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

Gata1/MA0035.3/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GACAGAAAAGTGATGA
-ANAGATAAGAA----
 C T A G C G T A G T A C C G T A A C T G C G T A C G T A C G T A G C T A C T A G C G A T C T A G C G T A C G A T A C T G C G T A
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GACAGAAAAGTGATGA
---AGAAACGAAAGT-
 C T A G C G T A G T A C C G T A A C T G C G T A C G T A C G T A G C T A C T A G C G A T C T A G C G T A C G A T A C T G C G T A
A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GACAGAAAAGTGATGA----
-----AAAWWTGCTGACWWD
 C T A G C G T A G T A C C G T A A C T G C G T A C G T A C G T A G C T A C T A G C G A T C T A G C G T A C G A T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GACAGAAAAGTGATGA
AAAACAAAGG------
 C T A G C G T A G T A C C G T A A C T G C G T A C G T A C G T A G C T A C T A G C G A T C T A G C G T A C G A T A C T G C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GACAGAAAAGTGATGA
-ANGNAAAGGTCA---
 C T A G C G T A G T A C C G T A A C T G C G T A C G T A C G T A G C T A C T A G C G A T C T A G C G T A C G A T A C T G C G T A
A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GACAGAAAAGTGATGA
TAACGACACGTGC---
 C T A G C G T A G T A C C G T A A C T G C G T A C G T A C G T A G C T A C T A G C G A T C T A G C G T A C G A T A C T G C G T A
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GACAGAAAAGTGATGA
NNGAGATAAGA-----
 C T A G C G T A G T A C C G T A A C T G C G T A C G T A C G T A G C T A C T A G C G A T C T A G C G T A C G A T A C T G C G T A
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T