Information for 18-GVACCAAATGAAACAA (Motif 28)

A C T G T A C G G T C A T A G C G T A C G T C A G C T A C G T A C G A T C T A G C T G A G C T A C T G A T G A C C G T A C G T A
Reverse Opposite:
A C G T C G A T A C T G A G C T C G A T A G C T A G T C G C T A A C G T C A G T A C G T A C T G A T C G A C G T A G T C G T A C
p-value:1e-6
log p-value:-1.520e+01
Information Content per bp:1.714
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif54.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets47.0 +/- 21.9bp
Average Position of motif in Background46.6 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GVACCAAATGAAACAA-
---AAATAAGAAAAAAC
 A C T G T A C G G T C A T A G C G T A C G T C A G C T A C G T A C G A T C T A G C T G A G C T A C T G A T G A C C G T A C G T A A C G T
A C G T A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GVACCAAATGAAACAA--
----TACTGGAAAAAAAA
 A C T G T A C G G T C A T A G C G T A C G T C A G C T A C G T A C G A T C T A G C T G A G C T A C T G A T G A C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PH0057.1_Hoxb13/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GVACCAAATGAAACAA-
-AACCCAATAAAATTCG
 A C T G T A C G G T C A T A G C G T A C G T C A G C T A C G T A C G A T C T A G C T G A G C T A C T G A T G A C C G T A C G T A A C G T
A C G T T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXB13/MA0901.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GVACCAAATGAAACAA
----CCAATAAAAC--
 A C T G T A C G G T C A T A G C G T A C G T C A G C T A C G T A C G A T C T A G C T G A G C T A C T G A T G A C C G T A C G T A
A C G T A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GVACCAAATGAAACAA
----CCAATAAAAA--
 A C T G T A C G G T C A T A G C G T A C G T C A G C T A C G T A C G A T C T A G C T G A G C T A C T G A T G A C C G T A C G T A
A C G T A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GVACCAAATGAAACAA
---CCYMATAAAA---
 A C T G T A C G G T C A T A G C G T A C G T C A G C T A C G T A C G A T C T A G C T G A G C T A C T G A T G A C C G T A C G T A
A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GVACCAAATGAAACAA
----CCAATAAAAA--
 A C T G T A C G G T C A T A G C G T A C G T C A G C T A C G T A C G A T C T A G C T G A G C T A C T G A T G A C C G T A C G T A
A C G T A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GVACCAAATGAAACAA--
------AAACAAACATTC
 A C T G T A C G G T C A T A G C G T A C G T C A G C T A C G T A C G A T C T A G C T G A G C T A C T G A T G A C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GVACCAAATGAAACAA-
-TGCCAAAATAAACANN
 A C T G T A C G G T C A T A G C G T A C G T C A G C T A C G T A C G A T C T A G C T G A G C T A C T G A T G A C C G T A C G T A A C G T
A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GVACCAAATGAAACAA---
----AACAAACAACAAGAG
 A C T G T A C G G T C A T A G C G T A C G T C A G C T A C G T A C G A T C T A G C T G A G C T A C T G A T G A C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G