Information for 2-RATGACRTCATHHHNW (Motif 2)

C T A G T C G A A C G T A C T G C G T A A G T C T C A G C G A T G T A C C G T A A G C T G A T C G T C A G T C A G C T A G C A T
Reverse Opposite:
C G T A C A G T C A G T C A G T C T A G T C G A A C G T A C T G C G T A A G T C T C A G A C G T G T A C C G T A A G C T G A T C
p-value:1e-146
log p-value:-3.366e+02
Information Content per bp:1.621
Number of Target Sequences with motif110.0
Percentage of Target Sequences with motif15.54%
Number of Background Sequences with motif139.3
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets52.5 +/- 13.0bp
Average Position of motif in Background52.3 +/- 41.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-RATGACRTCATHHHNW
NGATGACGTCAT-----
 A C G T C T A G T C G A A C G T A C T G C G T A A G T C T C A G C G A T G T A C C G T A A G C T G A T C G T C A G T C A G C T A G C A T
C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:2
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-RATGACRTCATHHHNW
NGATGACGTCAT-----
 A C G T C T A G T C G A A C G T A C T G C G T A A G T C T C A G C G A T G T A C C G T A A G C T G A T C G T C A G T C A G C T A G C A T
A G C T C T A G T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:3
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:RATGACRTCATHHHNW
NATGACATCATCNNN-
 C T A G T C G A A C G T A C T G C G T A A G T C T C A G C G A T G T A C C G T A A G C T G A T C G T C A G T C A G C T A G C A T
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:4
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-RATGACRTCATHHHNW
NRRTGACGTCAT-----
 A C G T C T A G T C G A A C G T A C T G C G T A A G T C T C A G C G A T G T A C C G T A A G C T G A T C G T C A G T C A G C T A G C A T
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-RATGACRTCATHHHNW
NGRTGACGTCAY-----
 A C G T C T A G T C G A A C G T A C T G C G T A A G T C T C A G C G A T G T A C C G T A A G C T G A T C G T C A G T C A G C T A G C A T
T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T A C G T A C G T A C G T A C G T A C G T

ATF7/MA0834.1/Jaspar

Match Rank:6
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-RATGACRTCATHHHNW
CGATGACGTCATCG---
 A C G T C T A G T C G A A C G T A C T G C G T A A G T C T C A G C G A T G T A C C G T A A G C T G A T C G T C A G T C A G C T A G C A T
A G T C C T A G T C G A C A G T C A T G C T G A A G T C T C A G C A G T T G A C C T G A A G C T G T A C T C A G A C G T A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:7
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:RATGACRTCATHHHNW
-ATGACATCATCNN--
 C T A G T C G A A C G T A C T G C G T A A G T C T C A G C G A T G T A C C G T A A G C T G A T C G T C A G T C A G C T A G C A T
A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T A C G T A C G T

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:8
Score:0.92
Offset:0
Orientation:forward strand
Alignment:RATGACRTCATHHHNW
GATGACGTCATC----
 C T A G T C G A A C G T A C T G C G T A A G T C T C A G C G A T G T A C C G T A A G C T G A T C G T C A G T C A G C T A G C A T
T A C G T C G A A G C T C A T G G T C A A G T C T C A G G A C T T G A C T G C A A G C T T G A C A C G T A C G T A C G T A C G T

PB0038.1_Jundm2_1/Jaspar

Match Rank:9
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--RATGACRTCATHHHNW
CCGATGACGTCATCGT--
 A C G T A C G T C T A G T C G A A C G T A C T G C G T A A G T C T C A G C G A T G T A C C G T A A G C T G A T C G T C A G T C A G C T A G C A T
A T G C A T G C A C T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T T G A C C T G A A G C T G T A C T C A G G A C T A C G T A C G T

Creb5/MA0840.1/Jaspar

Match Rank:10
Score:0.91
Offset:0
Orientation:forward strand
Alignment:RATGACRTCATHHHNW
AATGACGTCACC----
 C T A G T C G A A C G T A C T G C G T A A G T C T C A G C G A T G T A C C G T A A G C T G A T C G T C A G T C A G C T A G C A T
T C G A T C G A G A C T C A T G C G T A A G T C C T A G G C A T G T A C C G T A A G T C G A T C A C G T A C G T A C G T A C G T