Homer de novo Motif Results (hs_EmbryonicMesoderm_HUES64_normal_OTX2_SRX702054_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 40
Total background sequences = 48000
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * C G T A C T A G C G T A C G T A A G T C G T A C C A G T C T A G A C G T A G C T 1e-10-2.414e+0122.50%0.81%17.9bp (32.4bp)GRHL1/MA0647.1/Jaspar(0.849)
More Information | Similar Motifs Found		motif file (matrix)
2 * C G T A C G T A C G T A A C T G C T A G A G T C A C G T C G T A A C G T A G T C 1e-8-2.036e+0110.00%0.04%18.9bp (28.4bp)SD0003.1_at_AC_acceptor/Jaspar(0.700)
More Information | Similar Motifs Found		motif file (matrix)
3 * G A T C A G C T T A G C C T A G C T A G C T A G T A C G C G A T C A G T G T A C G C T A A C G T A G C T C A G T T C A G G T C A 1e-7-1.825e+0142.50%8.71%25.4bp (28.9bp)PB0083.1_Tcf7_1/Jaspar(0.522)
More Information | Similar Motifs Found		motif file (matrix)
4 * T A C G A T G C A G T C A G T C G T C A A C T G A C T G A G T C A G T C G C T A C A G T A C T G G T C A A T G C A C G T A C T G 1e-7-1.648e+0110.00%0.10%23.1bp (23.9bp)TFAP2A/MA0003.3/Jaspar(0.646)
More Information | Similar Motifs Found		motif file (matrix)
5 * A C T G T A C G A G C T C T G A T A C G G C T A C G T A C G T A A C T G C G T A C T G A G A T C C G T A 1e-7-1.643e+0122.50%1.98%32.0bp (25.2bp)Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer(0.625)
More Information | Similar Motifs Found		motif file (matrix)
6 * A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A T G C A C G T A C T G C G T A 1e-6-1.489e+015.00%0.00%21.8bp (0.0bp)RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer(0.751)
More Information | Similar Motifs Found		motif file (matrix)
7 * C G T A A G T C A C G T C G T A A C T G A C G T A C G T C G A T C G T A A G T C C G T A C G T A A C G T G T A C C G T A A G T C 1e-6-1.489e+015.00%0.00%21.4bp (0.0bp)PH0168.1_Hnf1b/Jaspar(0.615)
More Information | Similar Motifs Found		motif file (matrix)
8 * A C G T A G T C C A G T A C T G C G T A G T C A A G T C G A C T C T G A C A T G T A C G C T G A A C T G 1e-6-1.475e+0125.00%3.20%24.2bp (30.0bp)PB0115.1_Ehf_2/Jaspar(0.560)
More Information | Similar Motifs Found		motif file (matrix)
9 * C G T A G T A C G T C A A G T C A C T G C G T A A C G T A G T C A G T C A C G T 1e-5-1.295e+017.50%0.06%27.1bp (26.6bp)PH0044.1_Homez/Jaspar(0.600)
More Information | Similar Motifs Found		motif file (matrix)
10 * A G T C G A T C A C G T T A C G G C A T C A G T A T C G C G A T A C T G G T C A T C G A T C G A A C T G G T A C G A C T T A G C 1e-3-9.137e+0017.50%2.78%21.3bp (27.5bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.629)
More Information | Similar Motifs Found		motif file (matrix)