Information for 2-SCYCMGGCNATGMCTG (Motif 4)

T A C G A T G C A G T C A G T C G T C A A C T G A C T G A G T C A G T C G C T A C A G T A C T G G T C A A T G C A C G T A C T G
Reverse Opposite:
T A G C G T C A A T C G C A G T A G T C G T C A C G A T C T A G A C T G A G T C A G T C A C G T A C T G C T A G A T C G A T C G
p-value:1e-7
log p-value:-1.648e+01
Information Content per bp:1.709
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif45.7
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets34.8 +/- 23.1bp
Average Position of motif in Background44.2 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--SCYCMGGCNATGMCTG
CGCCTCAGGCA-------
 A C G T A C G T T A C G A T G C A G T C A G T C G T C A A C T G A C T G A G T C A G T C G C T A C A G T A C T G G T C A A T G C A C G T A C T G
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----SCYCMGGCNATGMCTG
NTNGCCTCAGGCNNN-----
 A C G T A C G T A C G T A C G T T A C G A T G C A G T C A G T C G T C A A C T G A C T G A G T C A G T C G C T A C A G T A C T G G T C A A T G C A C G T A C T G
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--SCYCMGGCNATGMCTG
AGCCTCAGGCA-------
 A C G T A C G T T A C G A T G C A G T C A G T C G T C A A C T G A C T G A G T C A G T C G C T A C A G T A C T G G T C A A T G C A C G T A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--SCYCMGGCNATGMCTG
AGCCTCAGGCA-------
 A C G T A C G T T A C G A T G C A G T C A G T C G T C A A C T G A C T G A G T C A G T C G C T A C A G T A C T G G T C A A T G C A C G T A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----SCYCMGGCNATGMCTG
ATTGCCTCAGGCAAT-----
 A C G T A C G T A C G T A C G T T A C G A T G C A G T C A G T C G T C A A C T G A C T G A G T C A G T C G C T A C A G T A C T G G T C A A T G C A C G T A C T G
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T A C G T A C G T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----SCYCMGGCNATGMCTG
NTCGCCTCAGGCAAT-----
 A C G T A C G T A C G T A C G T T A C G A T G C A G T C A G T C G T C A A C T G A C T G A G T C A G T C G C T A C A G T A C T G G T C A A T G C A C G T A C T G
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:SCYCMGGCNATGMCTG-
---CAGGCCNNGGCCNN
 T A C G A T G C A G T C A G T C G T C A A C T G A C T G A G T C A G T C G C T A C A G T A C T G G T C A A T G C A C G T A C T G A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-SCYCMGGCNATGMCTG
SCCTSAGGSCAW-----
 A C G T T A C G A T G C A G T C A G T C G T C A A C T G A C T G A G T C A G T C G C T A C A G T A C T G G T C A A T G C A C G T A C T G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-SCYCMGGCNATGMCTG
GCCTCAGGGCAT-----
 A C G T T A C G A T G C A G T C A G T C G T C A A C T G A C T G A G T C A G T C G C T A C A G T A C T G G T C A A T G C A C G T A C T G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----SCYCMGGCNATGMCTG
NTCCCCTCAGGGANT-----
 A C G T A C G T A C G T A C G T T A C G A T G C A G T C A G T C G T C A A C T G A C T G A G T C A G T C G C T A C A G T A C T G G T C A A T G C A C G T A C T G
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T A C G T A C G T A C G T A C G T A C G T