Information for 2-AAAGGCTATC (Motif 2)

C G T A C G T A C G T A A C T G C T A G A G T C A C G T C G T A A C G T A G T C
Reverse Opposite:
A C T G G T C A A C G T C G T A A C T G A G T C G T A C A C G T A C G T A C G T
p-value:1e-8
log p-value:-2.036e+01
Information Content per bp:1.905
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif17.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets22.8 +/- 18.9bp
Average Position of motif in Background44.9 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AAAGGCTATC--
-AAGGATATNTN
 C G T A C G T A C G T A A C T G C T A G A G T C A C G T C G T A A C G T A G T C A C G T A C G T
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Six3/MA0631.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAAGGCTATC------
GATAGGGTATCACTAAT
 A C G T C G T A C G T A C G T A A C T G C T A G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAAGGCTATC------
GATAGGGTATCACTAAT
 A C G T C G T A C G T A C G T A A C T G C T A G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAAGGCTATC------
AATAGGGTATCATATAT
 A C G T C G T A C G T A C G T A A C T G C T A G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAAGGCTATC------
AATAGGGTATCAATATT
 A C G T C G T A C G T A C G T A A C T G C T A G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGCTATC
ANGNAAAGGTCA--
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G C T A G A G T C A C G T C G T A A C G T A G T C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAAGGCTATC------
AATAGGGTATCAATTAT
 A C G T C G T A C G T A C G T A A C T G C T A G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

PH0161.1_Six1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAAGGCTATC------
GATGGGGTATCATTTTT
 A C G T C G T A C G T A C G T A A C T G C T A G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PH0162.1_Six2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAGGCTATC------
AATGGGGTATCACGTTT
 A C G T C G T A C G T A C G T A A C T G C T A G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAAGGCTATC------
ACATGCTACCTAATAC
 C G T A C G T A C G T A A C T G C T A G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C