Information for 2-GACCCTGACCTGA (Motif 6)

A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A T G C A C G T A C T G C G T A
Reverse Opposite:
A C G T G T A C C G T A A T C G A C T G A C G T A G T C C G T A A C T G A C T G A C T G A C G T A G T C
p-value:1e-6
log p-value:-1.489e+01
Information Content per bp:1.940
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif5.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 21.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GACCCTGACCTGA
TGACCTTGACCT--
 A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A T G C A C G T A C T G C G T A
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GACCCTGACCTGA
TGACCTTGACCT--
 A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A T G C A C G T A C T G C G T A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GACCCTGACCTGA
-----TGACCTYA
 A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A T G C A C G T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GACCCTGACCTGA
GCTGACCTTGAACTN-
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A T G C A C G T A C T G C G T A
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GACCCTGACCTGA-
--CGGTGACGTCAC
 A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A T G C A C G T A C T G C G T A A C G T
A C G T A C G T A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GACCCTGACCTGA
NATGACCTTGA-----
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A T G C A C G T A C T G C G T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GACCCTGACCTGA
TGACCTTGAV----
 A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A T G C A C G T A C T G C G T A
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GACCCTGACCTGA
-----TGACCT--
 A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A T G C A C G T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GACCCTGACCTGA
ATGACCTTGAA----
 A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A T G C A C G T A C T G C G T A
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GACCCTGACCTGA
AAGACCCYYN-----
 A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A T G C A C G T A C T G C G T A
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T A C G T A C G T