Information for 3-AMMCGAKCCT (Motif 9)

C G T A G T A C G T C A A G T C A C T G C G T A A C G T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G T G C A A C G T A G T C A C T G A C G T A C T G A C G T
p-value:1e-5
log p-value:-1.295e+01
Information Content per bp:1.876
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif7.50%
Number of Background Sequences with motif30.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets49.2 +/- 27.1bp
Average Position of motif in Background53.0 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AMMCGAKCCT--
NNTAAAAACGATGTTNT
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C G T C A A G T C A C T G C G T A A C G T A G T C A G T C A C G T A C G T A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AMMCGAKCCT--
--AAGACCCYYN
 C G T A G T A C G T C A A G T C A C T G C G T A A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

PB0037.1_Isgf3g_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AMMCGAKCCT--
CAAAATCGAAACTAA
 A C G T A C G T A C G T C G T A G T A C G T C A A G T C A C T G C G T A A C G T A G T C A G T C A C G T A C G T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AMMCGAKCCT--
ATAAACCGAAACCAA
 A C G T A C G T A C G T C G T A G T A C G T C A A G T C A C T G C G T A A C G T A G T C A G T C A C G T A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AMMCGAKCCT
-AGCGCGCC-
 C G T A G T A C G T C A A G T C A C T G C G T A A C G T A G T C A G T C A C G T
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

IRF8/MA0652.1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AMMCGAKCCT
TCGAAACCGAAACT
 A C G T A C G T A C G T A C G T C G T A G T A C G T C A A G T C A C T G C G T A A C G T A G T C A G T C A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AMMCGAKCCT
--ATAATCCC
 C G T A G T A C G T C A A G T C A C T G C G T A A C G T A G T C A G T C A C G T
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

HEY1/MA0823.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AMMCGAKCCT
GACACGTGCC-
 A C G T C G T A G T A C G T C A A G T C A C T G C G T A A C G T A G T C A G T C A C G T
T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AMMCGAKCCT
GWAAYHTGABMC-
 A C G T A C G T A C G T C G T A G T A C G T C A A G T C A C T G C G T A A C G T A G T C A G T C A C G T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AMMCGAKCCT
GWAAYHTGAKMC-
 A C G T A C G T A C G T C G T A G T A C G T C A A G T C A C T G C G T A A C G T A G T C A G T C A C G T
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T