Information for 3-TCTGAACTAGGAG (Motif 8)

A C G T A G T C C A G T A C T G C G T A G T C A A G T C G A C T C T G A C A T G T A C G C T G A A C T G
Reverse Opposite:
G T A C A G C T A T G C G A T C G A C T C G T A T A C G A C G T C G A T G T A C G T C A T C A G T G C A
p-value:1e-6
log p-value:-1.475e+01
Information Content per bp:1.633
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif1532.9
Percentage of Background Sequences with motif3.20%
Average Position of motif in Targets44.7 +/- 24.2bp
Average Position of motif in Background49.6 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0115.1_Ehf_2/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCTGAACTAGGAG
AAGATCGGAANTNNNA-
 A C G T A C G T A C G T A C G T A C G T A G T C C A G T A C T G C G T A G T C A A G T C G A C T C T G A C A T G T A C G C T G A A C T G
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCTGAACTAGGAG
-GTTAACTAGN--
 A C G T A G T C C A G T A C T G C G T A G T C A A G T C G A C T C T G A C A T G T A C G C T G A A C T G
A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TCTGAACTAGGAG--
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C A G T A C T G C G T A G T C A A G T C G A C T C T G A C A T G T A C G C T G A A C T G A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCTGAACTAGGAG
--GGAACAAAGR-
 A C G T A G T C C A G T A C T G C G T A G T C A A G T C G A C T C T G A C A T G T A C G C T G A A C T G
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TCTGAACTAGGAG-
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A C G T A G T C C A G T A C T G C G T A G T C A A G T C G A C T C T G A C A T G T A C G C T G A A C T G A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TCTGAACTAGGAG
--TGACCT-----
 A C G T A G T C C A G T A C T G C G T A G T C A A G T C G A C T C T G A C A T G T A C G C T G A A C T G
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TCTGAACTAGGAG---
AGAAGAACAAAGGACTA
 A C G T A C G T A G T C C A G T A C T G C G T A G T C A A G T C G A C T C T G A C A T G T A C G C T G A A C T G A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TCTGAACTAGGAG
-CTGACCTTTG--
 A C G T A G T C C A G T A C T G C G T A G T C A A G T C G A C T C T G A C A T G T A C G C T G A A C T G
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TCTGAACTAGGAG---
ATAAGAACAAAGGACTA
 A C G T A C G T A G T C C A G T A C T G C G T A G T C A A G T C G A C T C T G A C A T G T A C G C T G A A C T G A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TCTGAACTAGGAG--
NNAGGGACAAGGGCNC
 A C G T A C G T A G T C C A G T A C T G C G T A G T C A A G T C G A C T C T G A C A T G T A C G C T G A A C T G A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C