Homer de novo Motif Results (hs_macrophage_THP1_normal_VDR_SRX387776_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 834
Total background sequences = 47595
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C A G C T G A C T A G A C T G A G C T A G T C C T G A A G T C G C T A C T A G C T A G A C T G A C G T C A G T A G T C T C G A 1e-107-2.466e+026.95%0.04%20.9bp (22.4bp)VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer(0.980)
More Information | Similar Motifs Found
motif file (matrix)
2 A G T C A T C G C G T A C G A T C G A T C T A G A C T G G A T C A G C T T A C G 1e-43-1.004e+0213.55%2.69%26.9bp (32.7bp)NFY(CCAAT)/Promoter/Homer(0.946)
More Information | Similar Motifs Found
motif file (matrix)
3 A T C G A C G T A G T C G C A T A C G T C T A G A G T C A G T C G T C A A G T C A G C T A C G T G A C T G T A C C G T A G T A C 1e-15-3.585e+011.32%0.02%22.2bp (23.2bp)Nkx3-1/MA0124.2/Jaspar(0.637)
More Information | Similar Motifs Found
motif file (matrix)
4 C G T A C G T A A C T G G T C A C G T A A C T G G T C A A C T G A G C T A C T G C G T A C G T A A C T G A C T G C T A G A G T C 1e-13-3.088e+010.72%0.00%18.8bp (0.0bp)ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer(0.500)
More Information | Similar Motifs Found
motif file (matrix)
5 C T G A A C T G A C T G A T C G A C G T A C T G C T A G A T C G A C G T A G T C A G T C A C G T A C T G A C T G A G T C A G T C 1e-12-2.875e+010.96%0.01%19.9bp (26.7bp)Zfx/MA0146.2/Jaspar(0.591)
More Information | Similar Motifs Found
motif file (matrix)
6 * A C T G C T A G G T A C C G T A A T G C G T C A A G C T C T A G A G T C C T G A C T G A C G T A A C G T C G T A A C T G A C T G 1e-11-2.673e+010.72%0.00%29.0bp (28.8bp)Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer(0.574)
More Information | Similar Motifs Found
motif file (matrix)
7 * C G T A A G T C A G T C A G T C A C G T A C T G A G T C A G C T A C G T A C G T C G T A A C T G A G T C 1e-10-2.504e+010.60%0.00%27.8bp (0.0bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.566)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C T G C G T A C G T A A T C G A C G T G T C A A C T G A G T C C G T A C T A G C G T A A T C G A G T C 1e-10-2.504e+010.60%0.00%20.9bp (0.0bp)PB0155.1_Osr2_2/Jaspar(0.591)
More Information | Similar Motifs Found
motif file (matrix)
9 * C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A A C T G A C T G A T C G A T C G G T C A 1e-10-2.504e+010.60%0.00%34.7bp (7.2bp)ZNF354C/MA0130.1/Jaspar(0.664)
More Information | Similar Motifs Found
motif file (matrix)
10 * C G T A A T C G A G T C A C G T A C G T A T C G A C T G A C G T C G T A A G T C 1e-9-2.162e+010.84%0.02%18.6bp (26.3bp)Nr2e3/MA0164.1/Jaspar(0.701)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C T G A G T C A T G C A C G T A C T G G T A C A G T C A C T G A G T C G T A C A C G T A C T G G T C A 1e-9-2.159e+010.60%0.01%19.2bp (8.0bp)SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar(0.574)
More Information | Similar Motifs Found
motif file (matrix)
12 * A C T G A C T G A C T G G T C A A G T C A C T G C G T A A C T G A G T C C G A T C T A G A G T C C G T A 1e-9-2.159e+010.60%0.01%13.1bp (8.3bp)Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer(0.623)
More Information | Similar Motifs Found
motif file (matrix)
13 * T C A G C A G T A T G C A C T G G T A C C A G T A C T G A G T C T C G A C T A G 1e-9-2.125e+013.00%0.65%24.9bp (30.9bp)PB0091.1_Zbtb3_1/Jaspar(0.649)
More Information | Similar Motifs Found
motif file (matrix)
14 * G T C A G T A C G T C A C G T A A C T G C T G A A C T G A C T G A T C G A G T C C G T A A C T G A G T C 1e-8-1.973e+010.96%0.04%25.4bp (21.6bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.654)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T C G T A A G T C C T G A G T A C C G T A A G T C G C A T C T A G A C T G C G T A A C G T A C T G 1e-8-1.938e+010.48%0.00%27.8bp (0.0bp)Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.642)
More Information | Similar Motifs Found
motif file (matrix)
16 * A C T G C T A G A C T G A G T C A T C G A G C T A C T G A C G T A G T C A G C T A C G T A C T G A G T C 1e-8-1.885e+011.32%0.12%21.4bp (27.0bp)SP4/MA0685.1/Jaspar(0.751)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A T C A G C T A G C A G T T A G C T C G A A T G C G T A C C T G A A G T C 1e-7-1.801e+015.04%1.87%26.7bp (28.4bp)NR4A2/MA0160.1/Jaspar(0.776)
More Information | Similar Motifs Found
motif file (matrix)
18 * A G T C A G T C A C T G G T A C A C T G A G T C A C G T T C G A A C T G A G T C A G C T A C T G A C T G 1e-7-1.664e+010.72%0.02%25.8bp (38.4bp)Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer(0.536)
More Information | Similar Motifs Found
motif file (matrix)
19 * A T C G A C G T T A G C C T G A C T A G C A T G T A C G A G C T T A G C G T C A A T G C T A C G T A G C 1e-7-1.662e+010.48%0.01%21.5bp (8.2bp)PB0153.1_Nr2f2_2/Jaspar(0.684)
More Information | Similar Motifs Found
motif file (matrix)
20 * A T G C A C T G A C T G C G T A A G T C A C G T A C T G A C T G C G T A A T C G C G T A C T G A A C G T C A G T A G T C A C G T 1e-7-1.662e+010.48%0.00%23.9bp (0.9bp)NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer(0.555)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C G T A T C G A T G C G T A C A C T G A C T G A G T C G T C A C G A T A C G T 1e-7-1.625e+010.96%0.06%23.3bp (34.0bp)YY2/MA0748.1/Jaspar(0.626)
More Information | Similar Motifs Found
motif file (matrix)
22 * C A T G A G T C A G T C A T C G T A C G A T G C G T A C A T G C C T G A A C T G 1e-6-1.496e+013.48%1.16%26.3bp (28.8bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.702)
More Information | Similar Motifs Found
motif file (matrix)
23 * C A G T T A G C A G C T T A C G C A G T A T C G C G A T C A T G A C G T C T A G A C G T T A C G A G C T 1e-5-1.369e+012.04%0.48%19.9bp (28.2bp)PB0130.1_Gm397_2/Jaspar(0.690)
More Information | Similar Motifs Found
motif file (matrix)