Information for 7-KGMASAYRCRRWTWGG (Motif 6)

A C T G C T A G G T A C C G T A A T G C G T C A A G C T C T A G A G T C C T G A C T G A C G T A A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C G T A C C G A T C G T A C G A T A G C T A G C T A C T G A G T C C T G A A C G T T A C G A C G T A C T G A G T C T G A C
p-value:1e-11
log p-value:-2.673e+01
Information Content per bp:1.764
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.3 +/- 29.0bp
Average Position of motif in Background57.4 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:KGMASAYRCRRWTWGG
---ATATGCAAAT---
 A C T G C T A G G T A C C G T A A T G C G T C A A G C T C T A G A G T C C T G A C T G A C G T A A C G T C G T A A C T G A C T G
A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:KGMASAYRCRRWTWGG
---ATATGCAAATNNN
 A C T G C T A G G T A C C G T A A T G C G T C A A G C T C T A G A G T C C T G A C T G A C G T A A C G T C G T A A C T G A C T G
A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:KGMASAYRCRRWTWGG
---TTATGCAAAT---
 A C T G C T A G G T A C C G T A A T G C G T C A A G C T C T A G A G T C C T G A C T G A C G T A A C G T C G T A A C T G A C T G
A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---KGMASAYRCRRWTWGG
AGCGGCACACACGCAA---
 A C G T A C G T A C G T A C T G C T A G G T A C C G T A A T G C G T C A A G C T C T A G A G T C C T G A C T G A C G T A A C G T C G T A A C T G A C T G
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:KGMASAYRCRRWTWGG
--AATATGCAAATT--
 A C T G C T A G G T A C C G T A A T G C G T C A A G C T C T A G A G T C C T G A C T G A C G T A A C G T C G T A A C T G A C T G
A C G T A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:KGMASAYRCRRWTWGG
--AATATGCAAATTAG
 A C T G C T A G G T A C C G T A A T G C G T C A A G C T C T A G A G T C C T G A C T G A C G T A A C G T C G T A A C T G A C T G
A C G T A C G T C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:KGMASAYRCRRWTWGG
----WATGCAAATGAG
 A C T G C T A G G T A C C G T A A T G C G T C A A G C T C T A G A G T C C T G A C T G A C G T A A C G T C G T A A C T G A C T G
A C G T A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:KGMASAYRCRRWTWGG--
--------CCGATTGGCT
 A C T G C T A G G T A C C G T A A T G C G T C A A G C T C T A G A G T C C T G A C T G A C G T A A C G T C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-KGMASAYRCRRWTWGG
ATGMATATDC-------
 A C G T A C T G C T A G G T A C C G T A A T G C G T C A A G C T C T A G A G T C C T G A C T G A C G T A A C G T C G T A A C T G A C T G
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:10
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:KGMASAYRCRRWTWGG-------
--------CTGATTGGTCNATTT
 A C T G C T A G G T A C C G T A A T G C G T C A A G C T C T A G A G T C C T G A C T G A C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T