Information for 17-GTCAGGGTCACGC (Motif 19)

A T C G A C G T T A G C C T G A C T A G C A T G T A C G A G C T T A G C G T C A A T G C T A C G T A G C
Reverse Opposite:
A T C G A T G C T A C G C A G T A T C G T C G A A T G C G T A C G A T C G A C T A T C G T G C A T A G C
p-value:1e-7
log p-value:-1.662e+01
Information Content per bp:1.540
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.2 +/- 21.5bp
Average Position of motif in Background53.7 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GTCAGGGTCACGC-
CGCGCCGGGTCACGTA
 A C G T A C G T A T C G A C G T T A G C C T G A C T A G C A T G T A C G A G C T T A G C G T C A A T G C T A C G T A G C A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GTCAGGGTCACGC
BTCAAGGTCA---
 A T C G A C G T T A G C C T G A C T A G C A T G T A C G A G C T T A G C G T C A A T G C T A C G T A G C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTCAGGGTCACGC
--CAAGGHCANV-
 A T C G A C G T T A G C C T G A C T A G C A T G T A C G A G C T T A G C G T C A A T G C T A C G T A G C
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GTCAGGGTCACGC
AGGTCAAGGTCA---
 A C G T A C G T A T C G A C G T T A G C C T G A C T A G C A T G T A C G A G C T T A G C G T C A A T G C T A C G T A G C
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTCAGGGTCACGC
NTCAAGGTCA---
 A T C G A C G T T A G C C T G A C T A G C A T G T A C G A G C T T A G C G T C A A T G C T A C G T A G C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTCAGGGTCACGC
-TCAAGGTCAN--
 A T C G A C G T T A G C C T G A C T A G C A T G T A C G A G C T T A G C G T C A A T G C T A C G T A G C
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTCAGGGTCACGC--
TATTCAAGGTCATGCGA
 A C G T A C G T A T C G A C G T T A G C C T G A C T A G C A T G T A C G A G C T T A G C G T C A A T G C T A C G T A G C A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTCAGGGTCACGC
AAGTTCAAGGTCAGC-
 A C G T A C G T A C G T A T C G A C G T T A G C C T G A C T A G C A T G T A C G A G C T T A G C G T C A A T G C T A C G T A G C
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTCAGGGTCACGC
-TCAAGGTCAT--
 A T C G A C G T T A G C C T G A C T A G C A T G T A C G A G C T T A G C G T C A A T G C T A C G T A G C
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GTCAGGGTCACGC
----AGGTCA---
 A T C G A C G T T A G C C T G A C T A G C A T G T A C G A G C T T A G C G T C A A T G C T A C G T A G C
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T