Information for 1-YSATTGGYYG (Motif 2)

A G T C A T C G C G T A C G A T C G A T C T A G A C T G G A T C A G C T T A C G
Reverse Opposite:
A T G C T C G A C T A G A G T C G A T C C G T A C G T A A C G T T A G C T C A G
p-value:1e-43
log p-value:-1.004e+02
Information Content per bp:1.654
Number of Target Sequences with motif113.0
Percentage of Target Sequences with motif13.55%
Number of Background Sequences with motif1280.3
Percentage of Background Sequences with motif2.69%
Average Position of motif in Targets49.0 +/- 26.9bp
Average Position of motif in Background48.5 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.46
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-YSATTGGYYG
CCGATTGGCT-
 A C G T A G T C A T C G C G T A C G A T C G A T C T A G A C T G G A T C A G C T T A C G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:YSATTGGYYG--
TGATTGGCTANN
 A G T C A T C G C G T A C G A T C G A T C T A G A C T G G A T C A G C T T A C G A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-YSATTGGYYG----
CTGATTGGTCNATTT
 A C G T A G T C A T C G C G T A C G A T C G A T C T A G A C T G G A T C A G C T T A C G A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.82
Offset:-7
Orientation:forward strand
Alignment:-------YSATTGGYYG-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G C G T A C G A T C G A T C T A G A C T G G A T C A G C T T A C G A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.74
Offset:3
Orientation:forward strand
Alignment:YSATTGGYYG
---TTGGCA-
 A G T C A T C G C G T A C G A T C G A T C T A G A C T G G A T C A G C T T A C G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-YSATTGGYYG
TTGATTGN---
 A C G T A G T C A T C G C G T A C G A T C G A T C T A G A C T G G A T C A G C T T A C G
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-YSATTGGYYG
NTAATTGG---
 A C G T A G T C A T C G C G T A C G A T C G A T C T A G A C T G G A T C A G C T T A C G
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-YSATTGGYYG
NTAATTGG---
 A C G T A G T C A T C G C G T A C G A T C G A T C T A G A C T G G A T C A G C T T A C G
A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T

PH0089.1_Isx/Jaspar

Match Rank:9
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----YSATTGGYYG-
ACTCCTAATTAGTCGT
 A C G T A C G T A C G T A C G T A C G T A G T C A T C G C G T A C G A T C G A T C T A G A C T G G A T C A G C T T A C G A C G T
G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T

PH0005.1_Barhl1/Jaspar

Match Rank:10
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----YSATTGGYYG--
GNNTTAATTGGTTGTT
 A C G T A C G T A C G T A C G T A G T C A T C G C G T A C G A T C G A T C T A G A C T G G A T C A G C T T A C G A C G T A C G T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T