Information for 9-TGCCGGCATT (Motif 21)

A C G T A T C G A T G C G T A C A C T G A C T G A G T C G T C A C G A T A C G T
Reverse Opposite:
G T C A G C T A A C G T C T A G A G T C G T A C A C T G A T C G A T G C G T C A
p-value:1e-7
log p-value:-1.625e+01
Information Content per bp:1.848
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif30.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets44.0 +/- 23.3bp
Average Position of motif in Background57.5 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCCGGCATT-
GTCCGCCATTA
 A C G T A T C G A T G C G T A C A C T G A C T G A G T C G T C A C G A T A C G T A C G T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCCGGCATT
TACCCGCATN
 A C G T A T C G A T G C G T A C A C T G A C T G A G T C G T C A C G A T A C G T
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

GCM1/MA0646.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCCGGCATT
GTACCCGCATN
 A C G T A C G T A T C G A T G C G T A C A C T G A C T G A G T C G T C A C G A T A C G T
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

PB0024.1_Gcm1_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGCCGGCATT---
TCGTACCCGCATCATT
 A C G T A C G T A C G T A C G T A T C G A T G C G T A C A C T G A C T G A G T C G T C A C G A T A C G T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

Creb5/MA0840.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGCCGGCATT
NGTGACGTCATN
 A C G T A C G T A C G T A T C G A T G C G T A C A C T G A C T G A G T C G T C A C G A T A C G T
C T A G T C A G C G A T C A T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T A G C T

ATF7/MA0834.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGCCGGCATT-
NGATGACGTCATNN
 A C G T A C G T A C G T A C G T A T C G A T G C G T A C A C T G A C T G A G T C G T C A C G A T A C G T A C G T
A G T C C A T G T C G A G A C T A C T G G T C A A G T C T C A G G A C T G T A C G T C A A G C T G A T C T C A G

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGCCGGCATT
GATGACGTCATC
 A C G T A C G T A C G T A T C G A T G C G T A C A C T G A C T G A G T C G T C A C G A T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C A G A C G T G T A C C T G A A G C T A T G C

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCCGGCATT
CTGCCCGCA--
 A C G T A C G T A T C G A T G C G T A C A C T G A C T G A G T C G T C A C G A T A C G T
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCCGGCATT-
-RCCGGAAGTD
 A C G T A T C G A T G C G T A C A C T G A C T G A G T C G T C A C G A T A C G T A C G T
A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCCGGCATT
GGTTGGCAT-
 A C G T A T C G A T G C G T A C A C T G A C T G A G T C G T C A C G A T A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T