Information for 12-ACAAGAGGGCAGC (Motif 14)

G T C A G T A C G T C A C G T A A C T G C T G A A C T G A C T G A T C G A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A T G C A G T C A G T C A G C T A G T C C G A T A C G T A C T G A C G T
p-value:1e-8
log p-value:-1.973e+01
Information Content per bp:1.866
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif19.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets39.4 +/- 25.4bp
Average Position of motif in Background42.4 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ACAAGAGGGCAGC--
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T G T C A G T A C G T C A C G T A A C T G C T G A A C T G A C T G A T C G A G T C C G T A A C T G A G T C A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ACAAGAGGGCAGC
---TNNGGGCAG-
 G T C A G T A C G T C A C G T A A C T G C T G A A C T G A C T G A T C G A G T C C G T A A C T G A G T C
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ACAAGAGGGCAGC
-CAAGATGGCGGC
 G T C A G T A C G T C A C G T A A C T G C T G A A C T G A C T G A T C G A G T C C G T A A C T G A G T C
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACAAGAGGGCAGC----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T G T C A G T A C G T C A C G T A A C T G C T G A A C T G A C T G A T C G A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ACAAGAGGGCAGC
---TRAGGTCA--
 G T C A G T A C G T C A C G T A A C T G C T G A A C T G A C T G A T C G A G T C C G T A A C T G A G T C
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ACAAGAGGGCAGC
---AGRGGTCA--
 G T C A G T A C G T C A C G T A A C T G C T G A A C T G A C T G A T C G A G T C C G T A A C T G A G T C
A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ACAAGAGGGCAGC-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T G T C A G T A C G T C A C G T A A C T G C T G A A C T G A C T G A T C G A G T C C G T A A C T G A G T C A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACAAGAGGGCAGC
--CAAAGGTCAG-
 G T C A G T A C G T C A C G T A A C T G C T G A A C T G A C T G A T C G A G T C C G T A A C T G A G T C
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACAAGAGGGCAGC
TCACCTCTGGGCAG-
 A C G T A C G T G T C A G T A C G T C A C G T A A C T G C T G A A C T G A C T G A T C G A G T C C G T A A C T G A G T C
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACAAGAGGGCAGC
-CAAGATGGCGGC
 G T C A G T A C G T C A C G T A A C T G C T G A A C T G A C T G A T C G A G T C C G T A A C T G A G T C
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C