Homer de novo Motif Results (hs_OesophagealCarcinoma_KYSE70_cancer_SOX2_SRX277131_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 874
Total background sequences = 46806
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G T C A T A C G T C G A C G T A A T G C C G T A G T C A C G A T C T A G T C A G 1e-124-2.861e+0238.90%9.07%22.5bp (33.0bp)Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer(0.969)
More Information | Similar Motifs Found
motif file (matrix)
2 T G C A A G C T C T A G G T C A A T G C A C G T A G T C C G T A A G C T T A G C 1e-33-7.803e+014.92%0.34%26.7bp (28.0bp)AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.985)
More Information | Similar Motifs Found
motif file (matrix)
3 T C G A A T C G G A C T T A C G T G A C G T A C G T C A A G T C T A G C G A C T C T A G T A C G G C A T A C T G C T A G T G C A 1e-20-4.737e+014.35%0.57%25.9bp (24.5bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.903)
More Information | Similar Motifs Found
motif file (matrix)
4 G T A C G C A T A T C G C G T A G T C A C G A T A T C G T A C G A T G C A G C T A G T C G A C T G A C T C A G T A G C T C A T G 1e-17-4.039e+012.29%0.14%21.9bp (28.5bp)NFYB/MA0502.1/Jaspar(0.558)
More Information | Similar Motifs Found
motif file (matrix)
5 T G C A A C T G A G T C A C T G A G T C A C G T A C T G C G T A A G C T A C G T A C T G A C T G A T G C A C G T A C T G A T C G 1e-15-3.643e+010.80%0.00%21.4bp (0.0bp)POL004.1_CCAAT-box/Jaspar(0.680)
More Information | Similar Motifs Found
motif file (matrix)
6 A T G C G T A C A G C T A C G T C G A T A T C G G T C A C A T G G T A C A C G T 1e-15-3.525e+0112.81%5.57%26.2bp (29.6bp)Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer(0.817)
More Information | Similar Motifs Found
motif file (matrix)
7 A G T C T C G A G C T A C G A T A T C G C T A G A C T G A G T C A T C G A C T G T A C G A C T G A T G C 1e-14-3.437e+011.60%0.06%24.9bp (23.4bp)PB0039.1_Klf7_1/Jaspar(0.833)
More Information | Similar Motifs Found
motif file (matrix)
8 A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T C T G A C G A T C T G A 1e-13-3.049e+010.69%0.00%21.2bp (0.0bp)Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer(0.725)
More Information | Similar Motifs Found
motif file (matrix)
9 G T A C A C T G A T G C A C G T A C T G C T A G A G T C G T A C C G T A T G C A A C G T A C G T A C T G 1e-13-3.049e+010.69%0.00%25.2bp (0.0bp)NFY(CCAAT)/Promoter/Homer(0.717)
More Information | Similar Motifs Found
motif file (matrix)
10 C G A T C G T A C G T A A C T G T A G C C G T A A C T G C G T A C G T A C G T A A C T G T A C G C G T A A T C G C T G A A C G T 1e-13-3.049e+010.69%0.00%23.7bp (12.0bp)PH0037.1_Hdx/Jaspar(0.595)
More Information | Similar Motifs Found
motif file (matrix)
11 C T G A A G T C A C G T G T C A A G T C C G T A C G A T A G C T A C G T A G T C A G T C A G T C C T G A 1e-13-3.048e+011.72%0.10%22.9bp (35.8bp)GFY(?)/Promoter/Homer(0.910)
More Information | Similar Motifs Found
motif file (matrix)
12 C G T A A C T G A C G T A T G C A T G C A T C G A C T G A T C G A G T C G A C T A G C T A C T G A G T C 1e-12-2.988e+011.49%0.07%26.4bp (26.0bp)p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer(0.686)
More Information | Similar Motifs Found
motif file (matrix)
13 C T G A A C G T C T A G A C T G A C T G A C T G A G T C T G C A C T A G A C T G C G T A C T G A C T A G 1e-12-2.877e+010.80%0.01%25.2bp (10.4bp)E2F4/MA0470.1/Jaspar(0.690)
More Information | Similar Motifs Found
motif file (matrix)
14 A T G C C G T A T A C G T G C A A G C T T C A G A C G T A G T C A C G T T A C G A G T C C G T A G C T A C G T A T A C G T G C A 1e-12-2.839e+012.17%0.23%23.7bp (28.9bp)Ddit3::Cebpa/MA0019.1/Jaspar(0.579)
More Information | Similar Motifs Found
motif file (matrix)
15 * G A T C A C G T C A T G A C G T G T C A C G T A C G T A C T A G C G T A A G T C C G T A G C T A A T G C 1e-11-2.642e+012.06%0.22%27.5bp (30.4bp)PB0021.1_Gata3_1/Jaspar(0.693)
More Information | Similar Motifs Found
motif file (matrix)
16 * A T G C A C T G A C T G A T C G C G T A A C T G A C T G C T G A A C T G A G T C A G T C A C G T A C T G 1e-11-2.635e+010.69%0.01%26.0bp (16.3bp)POL003.1_GC-box/Jaspar(0.670)
More Information | Similar Motifs Found
motif file (matrix)
17 * A G C T G T A C C G T A A G C T A C G T A G T C C G T A C A G T A C T G G T A C 1e-11-2.576e+012.29%0.30%29.8bp (29.3bp)PB0178.1_Sox8_2/Jaspar(0.809)
More Information | Similar Motifs Found
motif file (matrix)
18 * C A G T C A T G G A C T C A T G T C A G G C A T G A C T C A G T A T C G G T A C 1e-10-2.508e+012.97%0.56%28.0bp (33.4bp)RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer(0.939)
More Information | Similar Motifs Found
motif file (matrix)
19 * A T C G C G T A C G T A C G T A A C T G A C T G A G T C C G T A C T A G C T G A G T A C C G T A A G T C G A C T A T G C A C G T 1e-10-2.472e+010.57%0.00%21.9bp (0.0bp)PB0130.1_Gm397_2/Jaspar(0.573)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C G T A G T C C G T A A G T C A C G T A C G T G T A C G T A C A C G T A C T G 1e-10-2.305e+011.95%0.24%31.2bp (27.6bp)ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer(0.899)
More Information | Similar Motifs Found
motif file (matrix)
21 * G A C T A C T G A C T G A C G T A C T G G T C A A G T C C G T A A G C T T G A C 1e-10-2.305e+011.95%0.24%21.9bp (30.4bp)Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer(0.729)
More Information | Similar Motifs Found
motif file (matrix)
22 * C T G A T G C A A C T G G T A C A C T G A T G C A G C T T G A C C G A T A G T C 1e-9-2.270e+012.29%0.36%25.8bp (31.0bp)POL006.1_BREu/Jaspar(0.612)
More Information | Similar Motifs Found
motif file (matrix)
23 * G A C T G T A C C G A T A T C G A G T C A C T G A C T G A C T G C G T A A C T G A G C T C G A T A C G T 1e-9-2.198e+010.80%0.02%27.7bp (15.3bp)ETV6/MA0645.1/Jaspar(0.561)
More Information | Similar Motifs Found
motif file (matrix)
24 * T C G A C G T A A T G C G T A C A C T G T C A G A G T C A C G T A T G C A G T C 1e-9-2.148e+011.72%0.20%30.7bp (31.8bp)TFCP2/MA0145.3/Jaspar(0.723)
More Information | Similar Motifs Found
motif file (matrix)
25 * A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C T G G T A C C G T A A C G T A C T G A G T C 1e-9-2.127e+010.57%0.01%28.6bp (0.0bp)POU2F2/MA0507.1/Jaspar(0.794)
More Information | Similar Motifs Found
motif file (matrix)
26 * A C T G A C T G C T G A T C G A A C T G A G C T C T G A A T G C A C G T A C G T A G T C A G T C T C A G 1e-9-2.127e+010.57%0.01%28.3bp (6.1bp)ETV6/MA0645.1/Jaspar(0.675)
More Information | Similar Motifs Found
motif file (matrix)
27 * A T C G A C T G C G T A A G C T A C G T A C G T A T C G A C G T A C T G A C T G 1e-8-2.011e+012.06%0.33%25.1bp (30.3bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.716)
More Information | Similar Motifs Found
motif file (matrix)
28 * A C T G A G T C C G T A A C G T C G A T A G T C A G T C A C G T A G T C A G C T 1e-8-1.965e+010.92%0.04%26.9bp (28.3bp)TEAD3/MA0808.1/Jaspar(0.776)
More Information | Similar Motifs Found
motif file (matrix)
29 * G T C A A C G T A C G T A C G T A C T G A C T G A G T C A C G T A G T C G T A C A G T C C G T A A C T G 1e-8-1.925e+010.57%0.01%30.9bp (17.6bp)POL013.1_MED-1/Jaspar(0.622)
More Information | Similar Motifs Found
motif file (matrix)
30 * A C G T A C T G C T G A A G T C C G T A A T C G A G T C A G T C A C G T C T A G A G T C C G T A C G T A 1e-8-1.912e+010.46%0.00%32.7bp (0.0bp)Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer(0.659)
More Information | Similar Motifs Found
motif file (matrix)
31 * A C T G A G T C A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G A G T C 1e-8-1.912e+010.46%0.00%26.0bp (0.0bp)Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer(0.537)
More Information | Similar Motifs Found
motif file (matrix)
32 * A G T C A C G T C G T A A T G C A G T C A G C T A G T C T A C G C G T A A C T G A T C G A G T C A C T G A C T G C T G A C G T A 1e-7-1.636e+010.46%0.01%25.4bp (20.9bp)E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer(0.653)
More Information | Similar Motifs Found
motif file (matrix)
33 * A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C G T A C 1e-5-1.334e+010.57%0.02%33.3bp (25.3bp)Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer(0.701)
More Information | Similar Motifs Found
motif file (matrix)
34 * A G T C C G T A A C T G A G T C C G T A A C G T C G T A A G T C A C G T A G T C 1e-3-7.293e+000.23%0.01%33.6bp (5.1bp)MAFK/MA0496.1/Jaspar(0.632)
More Information | Similar Motifs Found
motif file (matrix)
35 * A C G T A C G T A T C G C G T A A C T G A C T G A C G T C G T A A C T G A G C T 1e-2-6.695e+000.34%0.02%23.4bp (30.7bp)PB0154.1_Osr1_2/Jaspar(0.668)
More Information | Similar Motifs Found
motif file (matrix)