Information for 7-KGCCCTTTGWRWA (Motif 8)

A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T C T G A C G A T C T G A
Reverse Opposite:
A G C T C G T A A G C T C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C T G A G T C G T C A
p-value:1e-13
log p-value:-3.049e+01
Information Content per bp:1.878
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.4 +/- 21.2bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-KGCCCTTTGWRWA
CTGACCTTTG----
 A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T C T G A C G A T C T G A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--KGCCCTTTGWRWA--
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T C T G A C G A T C T G A A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:KGCCCTTTGWRWA
---CCTTTGTT--
 A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T C T G A C G A T C T G A
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:KGCCCTTTGWRWA
---CCWTTGTY--
 A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T C T G A C G A T C T G A
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----KGCCCTTTGWRWA
NNNGTGACCTTTGNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T C T G A C G A T C T G A
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----KGCCCTTTGWRWA
NNNNTGACCTTTNNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T C T G A C G A T C T G A
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--KGCCCTTTGWRWA
AGGVNCCTTTGT---
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T C T G A C G A T C T G A
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:KGCCCTTTGWRWA
TGACCTTTNCNT-
 A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T C T G A C G A T C T G A
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:forward strand
Alignment:KGCCCTTTGWRWA
----CTTTGT---
 A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T C T G A C G A T C T G A
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:KGCCCTTTGWRWA
---CCTTTGTTTT
 A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T C T G A C G A T C T G A
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T